Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav4d-3A0A075B625 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.83□□□□□ -0.04
Trav4d-3A0A075B625 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav4d-3A0A075B625 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4d-3A0A075B625 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4d-3A0A075B625 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4d-3A0A075B625 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4d-3A0A075B625 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4d-3A0A075B625 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4d-3A0A075B625 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4d-3A0A075B625 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4d-3A0A075B625 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4d-3A0A075B625 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4d-3A0A075B625 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4d-3A0A075B625 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4d-3A0A075B625 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav4d-3A0A075B625 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav4d-3A0A075B625 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4d-3A0A075B625 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4d-3A0A075B625 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4d-3A0A075B625 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Trav4d-3A0A075B625 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4d-3A0A075B625 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4d-3A0A075B625 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4d-3A0A075B625 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4d-3A0A075B625 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4d-3A0A075B625 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trav4d-3A0A075B625 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4d-3A0A075B625 Gm16148-201ENSMUST00000119653 893 ntBASIC14.78□□□□□ -0.04
Trav4d-3A0A075B625 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav4d-3A0A075B625 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.78□□□□□ -0.04
Trav4d-3A0A075B625 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4d-3A0A075B625 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4d-3A0A075B625 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4d-3A0A075B625 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4d-3A0A075B625 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4d-3A0A075B625 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav4d-3A0A075B625 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav4d-3A0A075B625 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4d-3A0A075B625 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4d-3A0A075B625 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4d-3A0A075B625 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4d-3A0A075B625 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav4d-3A0A075B625 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav4d-3A0A075B625 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4d-3A0A075B625 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4d-3A0A075B625 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4d-3A0A075B625 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4d-3A0A075B625 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav4d-3A0A075B625 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Trav4d-3A0A075B625 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4d-3A0A075B625 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav4d-3A0A075B625 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4d-3A0A075B625 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav4d-3A0A075B625 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav4d-3A0A075B625 Gm22567-201ENSMUST00000175542 342 ntBASIC14.74□□□□□ -0.05
Trav4d-3A0A075B625 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav4d-3A0A075B625 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4d-3A0A075B625 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4d-3A0A075B625 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms