Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ighv3-1A0A075B5S6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.33■□□□□ 0.36
Ighv3-1A0A075B5S6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ighv3-1A0A075B5S6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-1A0A075B5S6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-1A0A075B5S6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-1A0A075B5S6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-1A0A075B5S6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-1A0A075B5S6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.31■□□□□ 0.36
Ighv3-1A0A075B5S6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-1A0A075B5S6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-1A0A075B5S6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-1A0A075B5S6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv3-1A0A075B5S6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-1A0A075B5S6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ighv3-1A0A075B5S6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv3-1A0A075B5S6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-1A0A075B5S6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-1A0A075B5S6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv3-1A0A075B5S6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-1A0A075B5S6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-1A0A075B5S6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-1A0A075B5S6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv3-1A0A075B5S6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-1A0A075B5S6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv3-1A0A075B5S6 Gm45102-201ENSMUST00000207427 857 ntBASIC17.27■□□□□ 0.36
Ighv3-1A0A075B5S6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-1A0A075B5S6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-1A0A075B5S6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-1A0A075B5S6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-1A0A075B5S6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-1A0A075B5S6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-1A0A075B5S6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-1A0A075B5S6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-1A0A075B5S6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-1A0A075B5S6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-1A0A075B5S6 Gm14117-201ENSMUST00000122417 843 ntBASIC17.24■□□□□ 0.35
Ighv3-1A0A075B5S6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-1A0A075B5S6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-1A0A075B5S6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-1A0A075B5S6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv3-1A0A075B5S6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv3-1A0A075B5S6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-1A0A075B5S6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.23■□□□□ 0.35
Ighv3-1A0A075B5S6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.23■□□□□ 0.35
Ighv3-1A0A075B5S6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-1A0A075B5S6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-1A0A075B5S6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-1A0A075B5S6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-1A0A075B5S6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.22■□□□□ 0.35
Ighv3-1A0A075B5S6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-1A0A075B5S6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-1A0A075B5S6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-1A0A075B5S6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-1A0A075B5S6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-1A0A075B5S6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-1A0A075B5S6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-1A0A075B5S6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-1A0A075B5S6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-1A0A075B5S6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-1A0A075B5S6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms