Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubl3Q9Z2M6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubl3Q9Z2M6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ubl3Q9Z2M6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ubl3Q9Z2M6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubl3Q9Z2M6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubl3Q9Z2M6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubl3Q9Z2M6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubl3Q9Z2M6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubl3Q9Z2M6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ubl3Q9Z2M6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ubl3Q9Z2M6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubl3Q9Z2M6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubl3Q9Z2M6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubl3Q9Z2M6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubl3Q9Z2M6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.38■□□□□ 0.69
Ubl3Q9Z2M6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ubl3Q9Z2M6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubl3Q9Z2M6 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.38■□□□□ 0.69
Ubl3Q9Z2M6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubl3Q9Z2M6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
Ubl3Q9Z2M6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubl3Q9Z2M6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubl3Q9Z2M6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubl3Q9Z2M6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ubl3Q9Z2M6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubl3Q9Z2M6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubl3Q9Z2M6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ubl3Q9Z2M6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ubl3Q9Z2M6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.35■□□□□ 0.69
Ubl3Q9Z2M6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ubl3Q9Z2M6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubl3Q9Z2M6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubl3Q9Z2M6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubl3Q9Z2M6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.34■□□□□ 0.69
Ubl3Q9Z2M6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.34■□□□□ 0.69
Ubl3Q9Z2M6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ubl3Q9Z2M6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubl3Q9Z2M6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ubl3Q9Z2M6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Ubl3Q9Z2M6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ubl3Q9Z2M6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ubl3Q9Z2M6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ubl3Q9Z2M6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ubl3Q9Z2M6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubl3Q9Z2M6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubl3Q9Z2M6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ubl3Q9Z2M6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ubl3Q9Z2M6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Gm27502-201ENSMUST00000183495 199 ntBASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubl3Q9Z2M6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubl3Q9Z2M6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.29■□□□□ 0.68
Ubl3Q9Z2M6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubl3Q9Z2M6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms