Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim60Q8VI40 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim60Q8VI40 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim60Q8VI40 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Trim60Q8VI40 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Trim60Q8VI40 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim60Q8VI40 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Trim60Q8VI40 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim60Q8VI40 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Trim60Q8VI40 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim60Q8VI40 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim60Q8VI40 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim60Q8VI40 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Trim60Q8VI40 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trim60Q8VI40 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim60Q8VI40 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim60Q8VI40 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.63■■□□□ 1.21
Trim60Q8VI40 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Trim60Q8VI40 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Trim60Q8VI40 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim60Q8VI40 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim60Q8VI40 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
Trim60Q8VI40 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Trim60Q8VI40 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Trim60Q8VI40 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
Trim60Q8VI40 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim60Q8VI40 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Trim60Q8VI40 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim60Q8VI40 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trim60Q8VI40 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Trim60Q8VI40 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim60Q8VI40 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim60Q8VI40 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim60Q8VI40 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Trim60Q8VI40 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.61■■□□□ 1.21
Trim60Q8VI40 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim60Q8VI40 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim60Q8VI40 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim60Q8VI40 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim60Q8VI40 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Trim60Q8VI40 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim60Q8VI40 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim60Q8VI40 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Trim60Q8VI40 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim60Q8VI40 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim60Q8VI40 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim60Q8VI40 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim60Q8VI40 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim60Q8VI40 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Trim60Q8VI40 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
Trim60Q8VI40 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim60Q8VI40 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim60Q8VI40 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim60Q8VI40 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim60Q8VI40 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.57■■□□□ 1.2
Trim60Q8VI40 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.57■■□□□ 1.2
Trim60Q8VI40 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Trim60Q8VI40 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.57■■□□□ 1.2
Trim60Q8VI40 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim60Q8VI40 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.56■■□□□ 1.2
Trim60Q8VI40 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim60Q8VI40 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Trim60Q8VI40 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim60Q8VI40 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Trim60Q8VI40 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.55■■□□□ 1.2
Trim60Q8VI40 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim60Q8VI40 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim60Q8VI40 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trim60Q8VI40 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Trim60Q8VI40 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.53■■□□□ 1.2
Trim60Q8VI40 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim60Q8VI40 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim60Q8VI40 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim60Q8VI40 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.52■■□□□ 1.2
Trim60Q8VI40 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim60Q8VI40 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Trim60Q8VI40 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim60Q8VI40 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Trim60Q8VI40 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.51■■□□□ 1.19
Trim60Q8VI40 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim60Q8VI40 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim60Q8VI40 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.5■■□□□ 1.19
Trim60Q8VI40 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim60Q8VI40 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim60Q8VI40 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim60Q8VI40 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trim60Q8VI40 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim60Q8VI40 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim60Q8VI40 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim60Q8VI40 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim60Q8VI40 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim60Q8VI40 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms