Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim68Q8K243 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim68Q8K243 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim68Q8K243 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.63■■□□□ 1.37
Trim68Q8K243 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.63■■□□□ 1.37
Trim68Q8K243 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.63■■□□□ 1.37
Trim68Q8K243 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim68Q8K243 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim68Q8K243 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim68Q8K243 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim68Q8K243 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim68Q8K243 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim68Q8K243 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Trim68Q8K243 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim68Q8K243 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim68Q8K243 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim68Q8K243 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trim68Q8K243 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim68Q8K243 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.6■■□□□ 1.37
Trim68Q8K243 Etf1-202ENSMUST00000180351 108 ntBASIC23.6■■□□□ 1.37
Trim68Q8K243 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.6■■□□□ 1.37
Trim68Q8K243 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim68Q8K243 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.59■■□□□ 1.37
Trim68Q8K243 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim68Q8K243 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trim68Q8K243 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim68Q8K243 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim68Q8K243 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.59■■□□□ 1.37
Trim68Q8K243 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trim68Q8K243 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.58■■□□□ 1.37
Trim68Q8K243 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim68Q8K243 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.58■■□□□ 1.37
Trim68Q8K243 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim68Q8K243 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Trim68Q8K243 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim68Q8K243 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trim68Q8K243 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim68Q8K243 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Trim68Q8K243 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trim68Q8K243 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim68Q8K243 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Trim68Q8K243 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.56■■□□□ 1.36
Trim68Q8K243 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Trim68Q8K243 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trim68Q8K243 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim68Q8K243 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim68Q8K243 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.55■■□□□ 1.36
Trim68Q8K243 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.55■■□□□ 1.36
Trim68Q8K243 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim68Q8K243 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim68Q8K243 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim68Q8K243 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim68Q8K243 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim68Q8K243 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim68Q8K243 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Trim68Q8K243 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Trim68Q8K243 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim68Q8K243 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Trim68Q8K243 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.52■■□□□ 1.36
Trim68Q8K243 Gm10232-201ENSMUST00000089221 720 ntBASIC23.52■■□□□ 1.36
Trim68Q8K243 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.52■■□□□ 1.36
Trim68Q8K243 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.52■■□□□ 1.36
Trim68Q8K243 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim68Q8K243 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim68Q8K243 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim68Q8K243 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.51■■□□□ 1.35
Trim68Q8K243 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Trim68Q8K243 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim68Q8K243 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.51■■□□□ 1.35
Trim68Q8K243 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Trim68Q8K243 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim68Q8K243 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim68Q8K243 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.5■■□□□ 1.35
Trim68Q8K243 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim68Q8K243 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim68Q8K243 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Trim68Q8K243 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim68Q8K243 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Trim68Q8K243 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim68Q8K243 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.49■■□□□ 1.35
Trim68Q8K243 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim68Q8K243 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim68Q8K243 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim68Q8K243 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim68Q8K243 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim68Q8K243 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim68Q8K243 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
Trim68Q8K243 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.48■■□□□ 1.35
Trim68Q8K243 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim68Q8K243 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim68Q8K243 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim68Q8K243 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms