Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mmp28Q8CGV8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp28Q8CGV8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp28Q8CGV8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mmp28Q8CGV8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp28Q8CGV8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp28Q8CGV8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp28Q8CGV8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp28Q8CGV8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp28Q8CGV8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Mmp28Q8CGV8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp28Q8CGV8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp28Q8CGV8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp28Q8CGV8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp28Q8CGV8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp28Q8CGV8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp28Q8CGV8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp28Q8CGV8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Mmp28Q8CGV8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Mmp28Q8CGV8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Mmp28Q8CGV8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp28Q8CGV8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp28Q8CGV8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp28Q8CGV8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp28Q8CGV8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp28Q8CGV8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp28Q8CGV8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp28Q8CGV8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp28Q8CGV8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp28Q8CGV8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp28Q8CGV8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp28Q8CGV8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Mmp28Q8CGV8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp28Q8CGV8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp28Q8CGV8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Mmp28Q8CGV8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp28Q8CGV8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.58■□□□□ 0.56
Mmp28Q8CGV8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.58■□□□□ 0.56
Mmp28Q8CGV8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp28Q8CGV8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp28Q8CGV8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp28Q8CGV8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp28Q8CGV8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp28Q8CGV8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp28Q8CGV8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp28Q8CGV8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Mmp28Q8CGV8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp28Q8CGV8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.57■□□□□ 0.56
Mmp28Q8CGV8 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp28Q8CGV8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp28Q8CGV8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp28Q8CGV8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp28Q8CGV8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.55■□□□□ 0.56
Mmp28Q8CGV8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp28Q8CGV8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp28Q8CGV8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Mmp28Q8CGV8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp28Q8CGV8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp28Q8CGV8 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.54■□□□□ 0.56
Mmp28Q8CGV8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.54■□□□□ 0.56
Mmp28Q8CGV8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp28Q8CGV8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp28Q8CGV8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp28Q8CGV8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp28Q8CGV8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Mmp28Q8CGV8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp28Q8CGV8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp28Q8CGV8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp28Q8CGV8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp28Q8CGV8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp28Q8CGV8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp28Q8CGV8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp28Q8CGV8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.52■□□□□ 0.56
Mmp28Q8CGV8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Mmp28Q8CGV8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp28Q8CGV8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.52■□□□□ 0.56
Mmp28Q8CGV8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp28Q8CGV8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Mmp28Q8CGV8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp28Q8CGV8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp28Q8CGV8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp28Q8CGV8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Mmp28Q8CGV8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp28Q8CGV8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp28Q8CGV8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp28Q8CGV8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp28Q8CGV8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp28Q8CGV8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp28Q8CGV8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Mmp28Q8CGV8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms