Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SynpoQ8CC35 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SynpoQ8CC35 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SynpoQ8CC35 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.04■□□□□ 0.96
SynpoQ8CC35 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SynpoQ8CC35 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SynpoQ8CC35 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SynpoQ8CC35 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.03■□□□□ 0.96
SynpoQ8CC35 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SynpoQ8CC35 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SynpoQ8CC35 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SynpoQ8CC35 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SynpoQ8CC35 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SynpoQ8CC35 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
SynpoQ8CC35 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SynpoQ8CC35 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SynpoQ8CC35 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.01■□□□□ 0.95
SynpoQ8CC35 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SynpoQ8CC35 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.01■□□□□ 0.95
SynpoQ8CC35 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SynpoQ8CC35 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SynpoQ8CC35 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SynpoQ8CC35 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SynpoQ8CC35 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SynpoQ8CC35 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21■□□□□ 0.95
SynpoQ8CC35 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SynpoQ8CC35 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SynpoQ8CC35 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.99■□□□□ 0.95
SynpoQ8CC35 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SynpoQ8CC35 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.99■□□□□ 0.95
SynpoQ8CC35 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SynpoQ8CC35 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SynpoQ8CC35 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SynpoQ8CC35 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SynpoQ8CC35 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SynpoQ8CC35 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.98■□□□□ 0.95
SynpoQ8CC35 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SynpoQ8CC35 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SynpoQ8CC35 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SynpoQ8CC35 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SynpoQ8CC35 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SynpoQ8CC35 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SynpoQ8CC35 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SynpoQ8CC35 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SynpoQ8CC35 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.95■□□□□ 0.94
SynpoQ8CC35 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SynpoQ8CC35 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SynpoQ8CC35 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SynpoQ8CC35 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SynpoQ8CC35 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SynpoQ8CC35 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SynpoQ8CC35 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SynpoQ8CC35 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SynpoQ8CC35 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SynpoQ8CC35 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SynpoQ8CC35 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SynpoQ8CC35 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SynpoQ8CC35 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SynpoQ8CC35 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.93■□□□□ 0.94
SynpoQ8CC35 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SynpoQ8CC35 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SynpoQ8CC35 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
SynpoQ8CC35 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SynpoQ8CC35 Gm5921-201ENSMUST00000075898 882 ntBASIC20.92■□□□□ 0.94
SynpoQ8CC35 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SynpoQ8CC35 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SynpoQ8CC35 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SynpoQ8CC35 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SynpoQ8CC35 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.9■□□□□ 0.94
SynpoQ8CC35 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.9■□□□□ 0.94
SynpoQ8CC35 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SynpoQ8CC35 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms