Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Smim4Q8C1Q6 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.3■□□□□ 0.52
Smim4Q8C1Q6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smim4Q8C1Q6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim4Q8C1Q6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim4Q8C1Q6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.3■□□□□ 0.52
Smim4Q8C1Q6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smim4Q8C1Q6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim4Q8C1Q6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim4Q8C1Q6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim4Q8C1Q6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smim4Q8C1Q6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.27■□□□□ 0.52
Smim4Q8C1Q6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smim4Q8C1Q6 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.27■□□□□ 0.52
Smim4Q8C1Q6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smim4Q8C1Q6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smim4Q8C1Q6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smim4Q8C1Q6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smim4Q8C1Q6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim4Q8C1Q6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim4Q8C1Q6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim4Q8C1Q6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smim4Q8C1Q6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim4Q8C1Q6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim4Q8C1Q6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smim4Q8C1Q6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim4Q8C1Q6 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.25■□□□□ 0.51
Smim4Q8C1Q6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smim4Q8C1Q6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smim4Q8C1Q6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim4Q8C1Q6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim4Q8C1Q6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim4Q8C1Q6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smim4Q8C1Q6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim4Q8C1Q6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim4Q8C1Q6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim4Q8C1Q6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.22■□□□□ 0.51
Smim4Q8C1Q6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smim4Q8C1Q6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smim4Q8C1Q6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Smim4Q8C1Q6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smim4Q8C1Q6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim4Q8C1Q6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim4Q8C1Q6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim4Q8C1Q6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim4Q8C1Q6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim4Q8C1Q6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.21■□□□□ 0.51
Smim4Q8C1Q6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smim4Q8C1Q6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim4Q8C1Q6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Smim4Q8C1Q6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Smim4Q8C1Q6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smim4Q8C1Q6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim4Q8C1Q6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim4Q8C1Q6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim4Q8C1Q6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smim4Q8C1Q6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim4Q8C1Q6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smim4Q8C1Q6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smim4Q8C1Q6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms