Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne4Q8BLR2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne4Q8BLR2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne4Q8BLR2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cpne4Q8BLR2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne4Q8BLR2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne4Q8BLR2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne4Q8BLR2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne4Q8BLR2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cpne4Q8BLR2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne4Q8BLR2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne4Q8BLR2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne4Q8BLR2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne4Q8BLR2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne4Q8BLR2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.55■□□□□ 0.72
Cpne4Q8BLR2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne4Q8BLR2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne4Q8BLR2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne4Q8BLR2 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.54■□□□□ 0.72
Cpne4Q8BLR2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne4Q8BLR2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne4Q8BLR2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne4Q8BLR2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne4Q8BLR2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne4Q8BLR2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne4Q8BLR2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne4Q8BLR2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne4Q8BLR2 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.53■□□□□ 0.72
Cpne4Q8BLR2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cpne4Q8BLR2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne4Q8BLR2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne4Q8BLR2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne4Q8BLR2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne4Q8BLR2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.51■□□□□ 0.71
Cpne4Q8BLR2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne4Q8BLR2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne4Q8BLR2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne4Q8BLR2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne4Q8BLR2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne4Q8BLR2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cpne4Q8BLR2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne4Q8BLR2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Cpne4Q8BLR2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne4Q8BLR2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne4Q8BLR2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.48■□□□□ 0.71
Cpne4Q8BLR2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne4Q8BLR2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.48■□□□□ 0.71
Cpne4Q8BLR2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne4Q8BLR2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne4Q8BLR2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne4Q8BLR2 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.46■□□□□ 0.71
Cpne4Q8BLR2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cpne4Q8BLR2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne4Q8BLR2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne4Q8BLR2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne4Q8BLR2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne4Q8BLR2 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.45■□□□□ 0.7
Cpne4Q8BLR2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne4Q8BLR2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne4Q8BLR2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne4Q8BLR2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne4Q8BLR2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne4Q8BLR2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne4Q8BLR2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne4Q8BLR2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne4Q8BLR2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne4Q8BLR2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne4Q8BLR2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.43■□□□□ 0.7
Cpne4Q8BLR2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne4Q8BLR2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 1077 ms