Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Prpf40bQ80W14 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Prpf40bQ80W14 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
Prpf40bQ80W14 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf40bQ80W14 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf40bQ80W14 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.28■■□□□ 1.64
Prpf40bQ80W14 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Prpf40bQ80W14 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf40bQ80W14 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf40bQ80W14 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf40bQ80W14 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf40bQ80W14 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf40bQ80W14 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf40bQ80W14 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.27■■□□□ 1.64
Prpf40bQ80W14 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Prpf40bQ80W14 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Prpf40bQ80W14 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.26■■□□□ 1.63
Prpf40bQ80W14 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Prpf40bQ80W14 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Prpf40bQ80W14 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Prpf40bQ80W14 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Prpf40bQ80W14 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.23■■□□□ 1.63
Prpf40bQ80W14 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Prpf40bQ80W14 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Prpf40bQ80W14 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Prpf40bQ80W14 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.22■■□□□ 1.63
Prpf40bQ80W14 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Prpf40bQ80W14 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Prpf40bQ80W14 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Prpf40bQ80W14 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.21■■□□□ 1.63
Prpf40bQ80W14 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Prpf40bQ80W14 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Prpf40bQ80W14 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Prpf40bQ80W14 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Prpf40bQ80W14 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Prpf40bQ80W14 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Prpf40bQ80W14 Gm10232-201ENSMUST00000089221 720 ntBASIC25.2■■□□□ 1.62
Prpf40bQ80W14 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.2■■□□□ 1.62
Prpf40bQ80W14 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Prpf40bQ80W14 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Prpf40bQ80W14 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Prpf40bQ80W14 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Prpf40bQ80W14 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Prpf40bQ80W14 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Prpf40bQ80W14 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Prpf40bQ80W14 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Prpf40bQ80W14 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Prpf40bQ80W14 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
Prpf40bQ80W14 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Prpf40bQ80W14 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Prpf40bQ80W14 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Prpf40bQ80W14 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Prpf40bQ80W14 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.17■■□□□ 1.62
Prpf40bQ80W14 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Prpf40bQ80W14 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Prpf40bQ80W14 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Prpf40bQ80W14 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Prpf40bQ80W14 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Prpf40bQ80W14 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Prpf40bQ80W14 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Prpf40bQ80W14 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Prpf40bQ80W14 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Prpf40bQ80W14 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Prpf40bQ80W14 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.14■■□□□ 1.62
Prpf40bQ80W14 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.14■■□□□ 1.62
Prpf40bQ80W14 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Prpf40bQ80W14 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Prpf40bQ80W14 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Prpf40bQ80W14 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Prpf40bQ80W14 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Prpf40bQ80W14 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Prpf40bQ80W14 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Prpf40bQ80W14 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Prpf40bQ80W14 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Prpf40bQ80W14 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Prpf40bQ80W14 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Prpf40bQ80W14 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Prpf40bQ80W14 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Prpf40bQ80W14 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.1■■□□□ 1.61
Prpf40bQ80W14 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Prpf40bQ80W14 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Prpf40bQ80W14 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Prpf40bQ80W14 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Prpf40bQ80W14 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Prpf40bQ80W14 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Prpf40bQ80W14 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.09■■□□□ 1.61
Prpf40bQ80W14 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Prpf40bQ80W14 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Prpf40bQ80W14 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Prpf40bQ80W14 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Prpf40bQ80W14 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Prpf40bQ80W14 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms