Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.42■■□□□ 1.5
Abcf1Q6P542 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Abcf1Q6P542 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.42■■□□□ 1.5
Abcf1Q6P542 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Abcf1Q6P542 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Abcf1Q6P542 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Abcf1Q6P542 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
Abcf1Q6P542 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Abcf1Q6P542 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.41■■□□□ 1.5
Abcf1Q6P542 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Abcf1Q6P542 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Abcf1Q6P542 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Abcf1Q6P542 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Abcf1Q6P542 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Abcf1Q6P542 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Abcf1Q6P542 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Abcf1Q6P542 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Abcf1Q6P542 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Abcf1Q6P542 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Abcf1Q6P542 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.38■■□□□ 1.49
Abcf1Q6P542 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Abcf1Q6P542 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Abcf1Q6P542 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Abcf1Q6P542 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.37■■□□□ 1.49
Abcf1Q6P542 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Abcf1Q6P542 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.36■■□□□ 1.49
Abcf1Q6P542 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Abcf1Q6P542 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
Abcf1Q6P542 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Abcf1Q6P542 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Abcf1Q6P542 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Abcf1Q6P542 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Abcf1Q6P542 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.35■■□□□ 1.49
Abcf1Q6P542 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.35■■□□□ 1.49
Abcf1Q6P542 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Abcf1Q6P542 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Abcf1Q6P542 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Abcf1Q6P542 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Abcf1Q6P542 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Abcf1Q6P542 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Abcf1Q6P542 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Abcf1Q6P542 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Abcf1Q6P542 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Abcf1Q6P542 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Abcf1Q6P542 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.32■■□□□ 1.48
Abcf1Q6P542 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Abcf1Q6P542 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Abcf1Q6P542 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Abcf1Q6P542 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Abcf1Q6P542 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Abcf1Q6P542 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Abcf1Q6P542 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Abcf1Q6P542 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Abcf1Q6P542 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Abcf1Q6P542 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.31■■□□□ 1.48
Abcf1Q6P542 Gm45364-201ENSMUST00000210883 159 ntBASIC24.31■■□□□ 1.48
Abcf1Q6P542 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.3■■□□□ 1.48
Abcf1Q6P542 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Abcf1Q6P542 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Abcf1Q6P542 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Abcf1Q6P542 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.29■■□□□ 1.48
Abcf1Q6P542 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Abcf1Q6P542 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Abcf1Q6P542 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Abcf1Q6P542 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Abcf1Q6P542 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Abcf1Q6P542 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Abcf1Q6P542 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC24.27■■□□□ 1.48
Abcf1Q6P542 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Abcf1Q6P542 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Abcf1Q6P542 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Abcf1Q6P542 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Abcf1Q6P542 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Abcf1Q6P542 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Abcf1Q6P542 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Abcf1Q6P542 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Abcf1Q6P542 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.25■■□□□ 1.47
Abcf1Q6P542 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.25■■□□□ 1.47
Abcf1Q6P542 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abcf1Q6P542 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abcf1Q6P542 Gm11175-201ENSMUST00000116172 543 ntBASIC24.25■■□□□ 1.47
Abcf1Q6P542 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Abcf1Q6P542 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.25■■□□□ 1.47
Abcf1Q6P542 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abcf1Q6P542 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Abcf1Q6P542 Scarna2-201ENSMUST00000157560 414 ntBASIC24.24■■□□□ 1.47
Abcf1Q6P542 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Abcf1Q6P542 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Abcf1Q6P542 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Abcf1Q6P542 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Abcf1Q6P542 Mir6538-201ENSMUST00000183713 110 ntBASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms