Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.88■□□□□ 0.77
Cd47Q61735 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd47Q61735 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.88■□□□□ 0.77
Cd47Q61735 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.88■□□□□ 0.77
Cd47Q61735 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Cd47Q61735 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cd47Q61735 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd47Q61735 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd47Q61735 Notumos-201ENSMUST00000151998 2659 ntBASIC19.87■□□□□ 0.77
Cd47Q61735 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cd47Q61735 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd47Q61735 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cd47Q61735 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cd47Q61735 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cd47Q61735 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.86■□□□□ 0.77
Cd47Q61735 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd47Q61735 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cd47Q61735 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd47Q61735 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cd47Q61735 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd47Q61735 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd47Q61735 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd47Q61735 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd47Q61735 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.84■□□□□ 0.77
Cd47Q61735 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd47Q61735 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.84■□□□□ 0.77
Cd47Q61735 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd47Q61735 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.83■□□□□ 0.77
Cd47Q61735 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cd47Q61735 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cd47Q61735 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cd47Q61735 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd47Q61735 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd47Q61735 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd47Q61735 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.82■□□□□ 0.76
Cd47Q61735 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Cd47Q61735 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cd47Q61735 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cd47Q61735 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.81■□□□□ 0.76
Cd47Q61735 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd47Q61735 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.81■□□□□ 0.76
Cd47Q61735 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd47Q61735 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd47Q61735 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd47Q61735 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.8■□□□□ 0.76
Cd47Q61735 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cd47Q61735 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Cd47Q61735 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd47Q61735 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd47Q61735 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd47Q61735 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cd47Q61735 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cd47Q61735 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd47Q61735 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd47Q61735 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd47Q61735 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd47Q61735 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cd47Q61735 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd47Q61735 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cd47Q61735 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.78■□□□□ 0.76
Cd47Q61735 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cd47Q61735 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd47Q61735 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd47Q61735 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd47Q61735 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd47Q61735 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd47Q61735 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cd47Q61735 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd47Q61735 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd47Q61735 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd47Q61735 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cd47Q61735 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd47Q61735 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.76■□□□□ 0.75
Cd47Q61735 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cd47Q61735 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd47Q61735 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.75■□□□□ 0.75
Cd47Q61735 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cd47Q61735 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.75■□□□□ 0.75
Cd47Q61735 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.75■□□□□ 0.75
Cd47Q61735 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cd47Q61735 Gm6311-201ENSMUST00000073790 878 ntBASIC19.75■□□□□ 0.75
Cd47Q61735 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd47Q61735 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd47Q61735 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.75■□□□□ 0.75
Cd47Q61735 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.74■□□□□ 0.75
Cd47Q61735 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.74■□□□□ 0.75
Cd47Q61735 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd47Q61735 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cd47Q61735 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd47Q61735 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd47Q61735 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd47Q61735 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.74■□□□□ 0.75
Cd47Q61735 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.73■□□□□ 0.75
Cd47Q61735 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cd47Q61735 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Cd47Q61735 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd47Q61735 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd47Q61735 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd47Q61735 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd47Q61735 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms