Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom1Q5SX79 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Shroom1Q5SX79 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom1Q5SX79 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom1Q5SX79 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom1Q5SX79 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom1Q5SX79 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom1Q5SX79 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom1Q5SX79 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom1Q5SX79 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.34■■□□□ 1.33
Shroom1Q5SX79 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom1Q5SX79 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.34■■□□□ 1.33
Shroom1Q5SX79 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Shroom1Q5SX79 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom1Q5SX79 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
Shroom1Q5SX79 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom1Q5SX79 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom1Q5SX79 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom1Q5SX79 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom1Q5SX79 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Shroom1Q5SX79 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.33■■□□□ 1.33
Shroom1Q5SX79 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.33■■□□□ 1.32
Shroom1Q5SX79 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.32■■□□□ 1.32
Shroom1Q5SX79 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom1Q5SX79 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom1Q5SX79 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom1Q5SX79 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom1Q5SX79 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Shroom1Q5SX79 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Shroom1Q5SX79 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.31■■□□□ 1.32
Shroom1Q5SX79 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.31■■□□□ 1.32
Shroom1Q5SX79 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shroom1Q5SX79 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom1Q5SX79 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom1Q5SX79 Gm15820-201ENSMUST00000201566 728 ntBASIC23.3■■□□□ 1.32
Shroom1Q5SX79 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom1Q5SX79 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Shroom1Q5SX79 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom1Q5SX79 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.29■■□□□ 1.32
Shroom1Q5SX79 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.29■■□□□ 1.32
Shroom1Q5SX79 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom1Q5SX79 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom1Q5SX79 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.28■■□□□ 1.32
Shroom1Q5SX79 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom1Q5SX79 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom1Q5SX79 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom1Q5SX79 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.27■■□□□ 1.32
Shroom1Q5SX79 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.27■■□□□ 1.32
Shroom1Q5SX79 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom1Q5SX79 Rps24-207ENSMUST00000224568 714 ntBASIC23.26■■□□□ 1.31
Shroom1Q5SX79 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom1Q5SX79 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Shroom1Q5SX79 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.26■■□□□ 1.31
Shroom1Q5SX79 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom1Q5SX79 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom1Q5SX79 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom1Q5SX79 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Shroom1Q5SX79 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Shroom1Q5SX79 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom1Q5SX79 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom1Q5SX79 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom1Q5SX79 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom1Q5SX79 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom1Q5SX79 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom1Q5SX79 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom1Q5SX79 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom1Q5SX79 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.23■■□□□ 1.31
Shroom1Q5SX79 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Shroom1Q5SX79 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom1Q5SX79 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom1Q5SX79 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom1Q5SX79 Gm45102-201ENSMUST00000207427 857 ntBASIC23.22■■□□□ 1.31
Shroom1Q5SX79 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.22■■□□□ 1.31
Shroom1Q5SX79 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom1Q5SX79 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom1Q5SX79 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom1Q5SX79 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom1Q5SX79 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom1Q5SX79 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom1Q5SX79 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom1Q5SX79 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom1Q5SX79 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Shroom1Q5SX79 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom1Q5SX79 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom1Q5SX79 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom1Q5SX79 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom1Q5SX79 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom1Q5SX79 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.19■■□□□ 1.3
Shroom1Q5SX79 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom1Q5SX79 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom1Q5SX79 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Shroom1Q5SX79 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms