Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav7d-3Q5R1I1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7d-3Q5R1I1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav7d-3Q5R1I1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7d-3Q5R1I1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav7d-3Q5R1I1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16■□□□□ 0.15
Trav7d-3Q5R1I1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7d-3Q5R1I1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Trav7d-3Q5R1I1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav7d-3Q5R1I1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7d-3Q5R1I1 Gm45364-201ENSMUST00000210883 159 ntBASIC15.99■□□□□ 0.15
Trav7d-3Q5R1I1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav7d-3Q5R1I1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav7d-3Q5R1I1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-3Q5R1I1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-3Q5R1I1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-3Q5R1I1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-3Q5R1I1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-3Q5R1I1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-3Q5R1I1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-3Q5R1I1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-3Q5R1I1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-3Q5R1I1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-3Q5R1I1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav7d-3Q5R1I1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-3Q5R1I1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav7d-3Q5R1I1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-3Q5R1I1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7d-3Q5R1I1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7d-3Q5R1I1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav7d-3Q5R1I1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7d-3Q5R1I1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.96■□□□□ 0.15
Trav7d-3Q5R1I1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav7d-3Q5R1I1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.96■□□□□ 0.14
Trav7d-3Q5R1I1 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.96■□□□□ 0.14
Trav7d-3Q5R1I1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.95■□□□□ 0.14
Trav7d-3Q5R1I1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-3Q5R1I1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-3Q5R1I1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-3Q5R1I1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-3Q5R1I1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-3Q5R1I1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav7d-3Q5R1I1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-3Q5R1I1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-3Q5R1I1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-3Q5R1I1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-3Q5R1I1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-3Q5R1I1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav7d-3Q5R1I1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-3Q5R1I1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-3Q5R1I1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-3Q5R1I1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-3Q5R1I1 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.91■□□□□ 0.14
Trav7d-3Q5R1I1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7d-3Q5R1I1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav7d-3Q5R1I1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Trav7d-3Q5R1I1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav7d-3Q5R1I1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7d-3Q5R1I1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7d-3Q5R1I1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7d-3Q5R1I1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7d-3Q5R1I1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7d-3Q5R1I1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms