Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fndc4Q3TR08 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fndc4Q3TR08 Notumos-201ENSMUST00000151998 2659 ntBASIC18.56■□□□□ 0.56
Fndc4Q3TR08 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fndc4Q3TR08 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fndc4Q3TR08 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fndc4Q3TR08 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fndc4Q3TR08 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fndc4Q3TR08 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.55■□□□□ 0.56
Fndc4Q3TR08 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fndc4Q3TR08 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fndc4Q3TR08 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fndc4Q3TR08 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.54■□□□□ 0.56
Fndc4Q3TR08 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.54■□□□□ 0.56
Fndc4Q3TR08 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fndc4Q3TR08 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fndc4Q3TR08 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fndc4Q3TR08 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fndc4Q3TR08 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Fndc4Q3TR08 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fndc4Q3TR08 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fndc4Q3TR08 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fndc4Q3TR08 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fndc4Q3TR08 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
Fndc4Q3TR08 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fndc4Q3TR08 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fndc4Q3TR08 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Fndc4Q3TR08 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Fndc4Q3TR08 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Fndc4Q3TR08 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fndc4Q3TR08 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fndc4Q3TR08 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Fndc4Q3TR08 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fndc4Q3TR08 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fndc4Q3TR08 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fndc4Q3TR08 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.5■□□□□ 0.55
Fndc4Q3TR08 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.5■□□□□ 0.55
Fndc4Q3TR08 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Fndc4Q3TR08 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.5■□□□□ 0.55
Fndc4Q3TR08 Gm4799-201ENSMUST00000095396 657 ntBASIC18.5■□□□□ 0.55
Fndc4Q3TR08 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fndc4Q3TR08 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fndc4Q3TR08 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Fndc4Q3TR08 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fndc4Q3TR08 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fndc4Q3TR08 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Fndc4Q3TR08 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.49■□□□□ 0.55
Fndc4Q3TR08 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Fndc4Q3TR08 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Fndc4Q3TR08 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Fndc4Q3TR08 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Fndc4Q3TR08 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Fndc4Q3TR08 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fndc4Q3TR08 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Fndc4Q3TR08 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fndc4Q3TR08 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fndc4Q3TR08 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Fndc4Q3TR08 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.47■□□□□ 0.55
Fndc4Q3TR08 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fndc4Q3TR08 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Fndc4Q3TR08 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Fndc4Q3TR08 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Fndc4Q3TR08 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fndc4Q3TR08 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.46■□□□□ 0.55
Fndc4Q3TR08 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fndc4Q3TR08 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.45■□□□□ 0.54
Fndc4Q3TR08 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.45■□□□□ 0.54
Fndc4Q3TR08 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fndc4Q3TR08 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fndc4Q3TR08 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fndc4Q3TR08 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Fndc4Q3TR08 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.44■□□□□ 0.54
Fndc4Q3TR08 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fndc4Q3TR08 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fndc4Q3TR08 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fndc4Q3TR08 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fndc4Q3TR08 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Mir3960-201ENSMUST00000198213 73 ntBASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.42■□□□□ 0.54
Fndc4Q3TR08 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms