Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 PRY3YJL078C 2646 nt6.39□□□□□ -1.39
PDH1Q12428 snR82snR82 268 nt6.39□□□□□ -1.39
PDH1Q12428 YIR020W-AYIR020W-A 243 nt6.39□□□□□ -1.39
PDH1Q12428 SHP1YBL058W 1272 nt6.39□□□□□ -1.39
PDH1Q12428 DEF1YKL054C 2217 nt6.39□□□□□ -1.39
PDH1Q12428 STT3YGL022W 2157 nt6.38□□□□□ -1.39
PDH1Q12428 DRS1YLL008W 2259 nt6.38□□□□□ -1.39
PDH1Q12428 YDR015CYDR015C 240 nt6.38□□□□□ -1.39
PDH1Q12428 YNL285WYNL285W 372 nt6.38□□□□□ -1.39
PDH1Q12428 OPI11YPR044C 354 nt6.38□□□□□ -1.39
PDH1Q12428 YMR027WYMR027W 1413 nt6.38□□□□□ -1.39
PDH1Q12428 SKS1YPL026C 1509 nt6.38□□□□□ -1.39
PDH1Q12428 YGR054WYGR054W 1929 nt6.38□□□□□ -1.39
PDH1Q12428 LAG2YOL025W 1983 nt6.38□□□□□ -1.39
PDH1Q12428 CEM1YER061C 1329 nt6.37□□□□□ -1.39
PDH1Q12428 AI5_BETAQ0075 1065 nt6.37□□□□□ -1.39
PDH1Q12428 YGR068W-AYGR068W-A 96 nt6.37□□□□□ -1.39
PDH1Q12428 PAC10YGR078C 600 nt6.37□□□□□ -1.39
PDH1Q12428 OGG1YML060W 1131 nt6.37□□□□□ -1.39
PDH1Q12428 PPT1YGR123C 1542 nt6.36□□□□□ -1.39
PDH1Q12428 HHY1YEL059W 309 nt6.36□□□□□ -1.39
PDH1Q12428 QCR6YFR033C 444 nt6.36□□□□□ -1.39
PDH1Q12428 IRC11YOR013W 471 nt6.36□□□□□ -1.39
PDH1Q12428 SNT309YPR101W 528 nt6.36□□□□□ -1.39
PDH1Q12428 AMN1YBR158W 1650 nt6.36□□□□□ -1.39
PDH1Q12428 MRPL28YDR462W 444 nt6.35□□□□□ -1.39
PDH1Q12428 MDE1YJR024C 735 nt6.35□□□□□ -1.39
PDH1Q12428 GCV3YAL044C 513 nt6.35□□□□□ -1.39
PDH1Q12428 YLR126CYLR126C 756 nt6.35□□□□□ -1.39
PDH1Q12428 ATG17YLR423C 1254 nt6.35□□□□□ -1.39
PDH1Q12428 REC114YMR133W 1287 nt6.35□□□□□ -1.39
PDH1Q12428 KSH1YNL024C-A 219 nt6.35□□□□□ -1.39
PDH1Q12428 MSS1YMR023C 1581 nt6.35□□□□□ -1.39
PDH1Q12428 SRF1YDL133W 1314 nt6.34□□□□□ -1.39
PDH1Q12428 MAK31YCR020C-A 267 nt6.34□□□□□ -1.39
PDH1Q12428 MTC2YKL098W 1074 nt6.34□□□□□ -1.39
PDH1Q12428 YPR160C-AYPR160C-A 285 nt6.34□□□□□ -1.39
PDH1Q12428 ECM31YBR176W 939 nt6.34□□□□□ -1.39
PDH1Q12428 YBR241CYBR241C 1467 nt6.34□□□□□ -1.4
PDH1Q12428 HXT17YNR072W 1695 nt6.33□□□□□ -1.4
PDH1Q12428 YFL013W-AYFL013W-A 804 nt6.33□□□□□ -1.4
PDH1Q12428 HEM2YGL040C 1029 nt6.33□□□□□ -1.4
PDH1Q12428 RSC30YHR056C 2652 nt6.33□□□□□ -1.4
PDH1Q12428 RIX7YLL034C 2514 nt6.33□□□□□ -1.4
PDH1Q12428 EDC3YEL015W 1656 nt6.33□□□□□ -1.4
PDH1Q12428 PPS1YBR276C 2424 nt6.33□□□□□ -1.4
PDH1Q12428 IES1YFL013C 2079 nt6.32□□□□□ -1.4
PDH1Q12428 YDL085C-AYDL085C-A 207 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)BtG(GCC)B 71 nt6.32□□□□□ -1.4
PDH1Q12428 SUF16tG(GCC)C 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)D1tG(GCC)D1 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)D2tG(GCC)D2 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)EtG(GCC)E 71 nt6.32□□□□□ -1.4
PDH1Q12428 SUF20tG(GCC)F1 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)F2tG(GCC)F2 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)G1tG(GCC)G1 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)G2tG(GCC)G2 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)J1tG(GCC)J1 71 nt6.32□□□□□ -1.4
PDH1Q12428 SUF23tG(GCC)J2 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)MtG(GCC)M 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)O1tG(GCC)O1 71 nt6.32□□□□□ -1.4
PDH1Q12428 SUF17tG(GCC)O2 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)P1tG(GCC)P1 71 nt6.32□□□□□ -1.4
PDH1Q12428 tG(GCC)P2tG(GCC)P2 71 nt6.32□□□□□ -1.4
PDH1Q12428 MTR3YGR158C 753 nt6.32□□□□□ -1.4
PDH1Q12428 ASK1YKL052C 879 nt6.32□□□□□ -1.4
PDH1Q12428 MIA40YKL195W 1212 nt6.32□□□□□ -1.4
PDH1Q12428 ELA1YNL230C 1140 nt6.32□□□□□ -1.4
PDH1Q12428 YPL250W-AYPL250W-A 288 nt6.32□□□□□ -1.4
PDH1Q12428 RPS5YJR123W 678 nt6.31□□□□□ -1.4
PDH1Q12428 MRPS12YNR036C 462 nt6.31□□□□□ -1.4
PDH1Q12428 LDB16YCL005W 771 nt6.31□□□□□ -1.4
PDH1Q12428 EDE1YBL047C 4146 nt6.31□□□□□ -1.4
PDH1Q12428 SEC23YPR181C 2307 nt6.31□□□□□ -1.4
PDH1Q12428 NMT1YLR195C 1368 nt6.31□□□□□ -1.4
PDH1Q12428 ERS1YCR075C 783 nt6.3□□□□□ -1.4
PDH1Q12428 YJL211CYJL211C 444 nt6.3□□□□□ -1.4
PDH1Q12428 MEH1YKR007W 555 nt6.3□□□□□ -1.4
PDH1Q12428 EFM1YHL039W 1758 nt6.3□□□□□ -1.4
PDH1Q12428 MCH2YKL221W 1422 nt6.3□□□□□ -1.4
PDH1Q12428 NTE1YML059C 5040 nt6.3□□□□□ -1.4
PDH1Q12428 KIN1YDR122W 3195 nt6.29□□□□□ -1.4
PDH1Q12428 PRS2YER099C 957 nt6.29□□□□□ -1.4
PDH1Q12428 RDN5-2RDN5-2 119 nt6.29□□□□□ -1.4
PDH1Q12428 RDN5-3RDN5-3 119 nt6.29□□□□□ -1.4
PDH1Q12428 RDN5-4RDN5-4 119 nt6.29□□□□□ -1.4
PDH1Q12428 RDN5-5RDN5-5 119 nt6.29□□□□□ -1.4
PDH1Q12428 CAF40YNL288W 1122 nt6.29□□□□□ -1.4
PDH1Q12428 ARC35YNR035C 1029 nt6.29□□□□□ -1.4
PDH1Q12428 RPO26YPR187W 468 nt6.29□□□□□ -1.4
PDH1Q12428 ICL1YER065C 1674 nt6.29□□□□□ -1.4
PDH1Q12428 ACO1YLR304C 2337 nt6.28□□□□□ -1.4
PDH1Q12428 YET3YDL072C 612 nt6.28□□□□□ -1.4
PDH1Q12428 RPN11YFR004W 921 nt6.28□□□□□ -1.4
PDH1Q12428 CYB2YML054C 1776 nt6.28□□□□□ -1.4
PDH1Q12428 HEM1YDR232W 1647 nt6.28□□□□□ -1.4
PDH1Q12428 ICL2YPR006C 1728 nt6.28□□□□□ -1.4
PDH1Q12428 NPL6YMR091C 1308 nt6.27□□□□□ -1.41
PDH1Q12428 VTS1YOR359W 1572 nt6.27□□□□□ -1.41
PDH1Q12428 MNS1YJR131W 1650 nt6.27□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 28 ms