Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shox2P70390 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shox2P70390 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shox2P70390 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shox2P70390 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.87■■□□□ 1.09
Shox2P70390 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shox2P70390 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shox2P70390 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shox2P70390 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Shox2P70390 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shox2P70390 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shox2P70390 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shox2P70390 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Shox2P70390 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shox2P70390 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shox2P70390 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shox2P70390 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shox2P70390 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shox2P70390 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shox2P70390 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Shox2P70390 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shox2P70390 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.83■■□□□ 1.09
Shox2P70390 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Shox2P70390 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.83■■□□□ 1.08
Shox2P70390 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Shox2P70390 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Shox2P70390 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shox2P70390 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shox2P70390 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Shox2P70390 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Shox2P70390 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Shox2P70390 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Shox2P70390 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.82■■□□□ 1.08
Shox2P70390 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shox2P70390 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shox2P70390 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shox2P70390 Gm22567-201ENSMUST00000175542 342 ntBASIC21.81■■□□□ 1.08
Shox2P70390 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
Shox2P70390 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shox2P70390 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shox2P70390 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shox2P70390 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Shox2P70390 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.8■■□□□ 1.08
Shox2P70390 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shox2P70390 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shox2P70390 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shox2P70390 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shox2P70390 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shox2P70390 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shox2P70390 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shox2P70390 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Shox2P70390 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.79■■□□□ 1.08
Shox2P70390 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Shox2P70390 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shox2P70390 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shox2P70390 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shox2P70390 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Shox2P70390 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shox2P70390 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Shox2P70390 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.76■■□□□ 1.07
Shox2P70390 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shox2P70390 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shox2P70390 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shox2P70390 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shox2P70390 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Shox2P70390 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shox2P70390 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shox2P70390 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shox2P70390 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shox2P70390 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shox2P70390 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shox2P70390 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.74■■□□□ 1.07
Shox2P70390 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Shox2P70390 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shox2P70390 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shox2P70390 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shox2P70390 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shox2P70390 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Shox2P70390 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Shox2P70390 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shox2P70390 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shox2P70390 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shox2P70390 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shox2P70390 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shox2P70390 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.71■■□□□ 1.07
Shox2P70390 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shox2P70390 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.71■■□□□ 1.07
Shox2P70390 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shox2P70390 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.71■■□□□ 1.07
Shox2P70390 Gm37136-201ENSMUST00000194368 194 ntBASIC21.71■■□□□ 1.07
Shox2P70390 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Shox2P70390 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shox2P70390 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Shox2P70390 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shox2P70390 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.7■■□□□ 1.06
Shox2P70390 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shox2P70390 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shox2P70390 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.69■■□□□ 1.06
Shox2P70390 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shox2P70390 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms