Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a1P31648 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc6a1P31648 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a1P31648 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a1P31648 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Slc6a1P31648 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a1P31648 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Slc6a1P31648 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a1P31648 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Slc6a1P31648 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Slc6a1P31648 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Slc6a1P31648 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.79■□□□□ 0.6
Slc6a1P31648 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a1P31648 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a1P31648 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a1P31648 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a1P31648 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Slc6a1P31648 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a1P31648 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a1P31648 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a1P31648 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a1P31648 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.78■□□□□ 0.6
Slc6a1P31648 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a1P31648 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Slc6a1P31648 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a1P31648 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a1P31648 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a1P31648 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a1P31648 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Slc6a1P31648 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a1P31648 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a1P31648 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a1P31648 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.77■□□□□ 0.59
Slc6a1P31648 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.76■□□□□ 0.59
Slc6a1P31648 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a1P31648 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a1P31648 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.76■□□□□ 0.59
Slc6a1P31648 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a1P31648 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a1P31648 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a1P31648 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Slc6a1P31648 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a1P31648 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slc6a1P31648 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a1P31648 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slc6a1P31648 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a1P31648 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a1P31648 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a1P31648 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a1P31648 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.74■□□□□ 0.59
Slc6a1P31648 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.74■□□□□ 0.59
Slc6a1P31648 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a1P31648 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a1P31648 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Slc6a1P31648 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.74■□□□□ 0.59
Slc6a1P31648 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a1P31648 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Slc6a1P31648 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a1P31648 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a1P31648 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a1P31648 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Slc6a1P31648 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Slc6a1P31648 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a1P31648 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.72■□□□□ 0.59
Slc6a1P31648 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Slc6a1P31648 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.72■□□□□ 0.59
Slc6a1P31648 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a1P31648 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a1P31648 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a1P31648 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a1P31648 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slc6a1P31648 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a1P31648 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.71■□□□□ 0.59
Slc6a1P31648 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a1P31648 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a1P31648 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a1P31648 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc6a1P31648 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.7■□□□□ 0.58
Slc6a1P31648 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a1P31648 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc6a1P31648 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a1P31648 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Slc6a1P31648 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a1P31648 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a1P31648 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a1P31648 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Slc6a1P31648 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Slc6a1P31648 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.68■□□□□ 0.58
Slc6a1P31648 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc6a1P31648 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a1P31648 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a1P31648 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a1P31648 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a1P31648 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a1P31648 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a1P31648 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a1P31648 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a1P31648 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a1P31648 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Slc6a1P31648 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms