Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf1aP25118 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf1aP25118 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Tnfrsf1aP25118 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf1aP25118 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf1aP25118 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf1aP25118 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf1aP25118 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf1aP25118 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf1aP25118 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf1aP25118 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf1aP25118 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf1aP25118 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.26■□□□□ 0.51
Tnfrsf1aP25118 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf1aP25118 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf1aP25118 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf1aP25118 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf1aP25118 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf1aP25118 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Tnfrsf1aP25118 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf1aP25118 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf1aP25118 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf1aP25118 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf1aP25118 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf1aP25118 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf1aP25118 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tnfrsf1aP25118 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.19■□□□□ 0.5
Tnfrsf1aP25118 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf1aP25118 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tnfrsf1aP25118 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf1aP25118 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf1aP25118 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf1aP25118 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf1aP25118 Scarna2-201ENSMUST00000157560 414 ntBASIC18.18■□□□□ 0.5
Tnfrsf1aP25118 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf1aP25118 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf1aP25118 Gm9806-201ENSMUST00000051080 552 ntBASIC18.17■□□□□ 0.5
Tnfrsf1aP25118 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf1aP25118 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf1aP25118 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf1aP25118 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Gm44428-201ENSMUST00000204474 874 ntBASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf1aP25118 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tnfrsf1aP25118 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms