Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TprF6ZDS4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TprF6ZDS4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TprF6ZDS4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TprF6ZDS4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TprF6ZDS4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.25■□□□□ 0.83
TprF6ZDS4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TprF6ZDS4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TprF6ZDS4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.24■□□□□ 0.83
TprF6ZDS4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TprF6ZDS4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TprF6ZDS4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TprF6ZDS4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.23■□□□□ 0.83
TprF6ZDS4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.23■□□□□ 0.83
TprF6ZDS4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.22■□□□□ 0.83
TprF6ZDS4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TprF6ZDS4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TprF6ZDS4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TprF6ZDS4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TprF6ZDS4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TprF6ZDS4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TprF6ZDS4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.21■□□□□ 0.83
TprF6ZDS4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TprF6ZDS4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TprF6ZDS4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.21■□□□□ 0.83
TprF6ZDS4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TprF6ZDS4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TprF6ZDS4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TprF6ZDS4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TprF6ZDS4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TprF6ZDS4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TprF6ZDS4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TprF6ZDS4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TprF6ZDS4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TprF6ZDS4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TprF6ZDS4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.17■□□□□ 0.82
TprF6ZDS4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TprF6ZDS4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TprF6ZDS4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TprF6ZDS4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TprF6ZDS4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
TprF6ZDS4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TprF6ZDS4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TprF6ZDS4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TprF6ZDS4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TprF6ZDS4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TprF6ZDS4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TprF6ZDS4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.15■□□□□ 0.82
TprF6ZDS4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.15■□□□□ 0.82
TprF6ZDS4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TprF6ZDS4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TprF6ZDS4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TprF6ZDS4 Gm7417-201ENSMUST00000192950 473 ntBASIC20.15■□□□□ 0.82
TprF6ZDS4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TprF6ZDS4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TprF6ZDS4 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.14■□□□□ 0.82
TprF6ZDS4 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.14■□□□□ 0.82
TprF6ZDS4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.14■□□□□ 0.82
TprF6ZDS4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TprF6ZDS4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.14■□□□□ 0.81
TprF6ZDS4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.14■□□□□ 0.81
TprF6ZDS4 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.14■□□□□ 0.81
TprF6ZDS4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TprF6ZDS4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TprF6ZDS4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TprF6ZDS4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TprF6ZDS4 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.13■□□□□ 0.81
TprF6ZDS4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TprF6ZDS4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TprF6ZDS4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TprF6ZDS4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TprF6ZDS4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TprF6ZDS4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TprF6ZDS4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TprF6ZDS4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TprF6ZDS4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TprF6ZDS4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TprF6ZDS4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.12■□□□□ 0.81
TprF6ZDS4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TprF6ZDS4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TprF6ZDS4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TprF6ZDS4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TprF6ZDS4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TprF6ZDS4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TprF6ZDS4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TprF6ZDS4 Gm12922-201ENSMUST00000120626 809 ntBASIC20.11■□□□□ 0.81
TprF6ZDS4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.1■□□□□ 0.81
TprF6ZDS4 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.1■□□□□ 0.81
TprF6ZDS4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.1■□□□□ 0.81
TprF6ZDS4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TprF6ZDS4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TprF6ZDS4 Gm18284-201ENSMUST00000172604 624 ntBASIC20.1■□□□□ 0.81
TprF6ZDS4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TprF6ZDS4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.1■□□□□ 0.81
TprF6ZDS4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TprF6ZDS4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TprF6ZDS4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TprF6ZDS4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TprF6ZDS4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TprF6ZDS4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms