Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh17E9PXF0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pcdh17E9PXF0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh17E9PXF0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdh17E9PXF0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdh17E9PXF0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh17E9PXF0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh17E9PXF0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh17E9PXF0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Gm15820-201ENSMUST00000201566 728 ntBASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdh17E9PXF0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh17E9PXF0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh17E9PXF0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh17E9PXF0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh17E9PXF0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh17E9PXF0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Rps24-207ENSMUST00000224568 714 ntBASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms