Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.27■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.27■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Gm13238-201ENSMUST00000117655 780 ntBASIC18.25■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.25■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Gm45102-201ENSMUST00000207427 857 ntBASIC18.23■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.22■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.21■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rpl13a-ps1A0A140T8K2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.2■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.19■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.16■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rpl13a-ps1A0A140T8K2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.13■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rpl13a-ps1A0A140T8K2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms