Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.77■■□□□ 1.08
Ccdc194A0A140LIT1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Ccdc194A0A140LIT1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc194A0A140LIT1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc194A0A140LIT1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc194A0A140LIT1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc194A0A140LIT1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc194A0A140LIT1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc194A0A140LIT1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc194A0A140LIT1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.75■■□□□ 1.07
Ccdc194A0A140LIT1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ccdc194A0A140LIT1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc194A0A140LIT1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc194A0A140LIT1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc194A0A140LIT1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc194A0A140LIT1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc194A0A140LIT1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc194A0A140LIT1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc194A0A140LIT1 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.73■■□□□ 1.07
Ccdc194A0A140LIT1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc194A0A140LIT1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc194A0A140LIT1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc194A0A140LIT1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc194A0A140LIT1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc194A0A140LIT1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc194A0A140LIT1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc194A0A140LIT1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc194A0A140LIT1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc194A0A140LIT1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc194A0A140LIT1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc194A0A140LIT1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ccdc194A0A140LIT1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc194A0A140LIT1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc194A0A140LIT1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc194A0A140LIT1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc194A0A140LIT1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc194A0A140LIT1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc194A0A140LIT1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.68■■□□□ 1.06
Ccdc194A0A140LIT1 Gm6311-201ENSMUST00000073790 878 ntBASIC21.68■■□□□ 1.06
Ccdc194A0A140LIT1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc194A0A140LIT1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc194A0A140LIT1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc194A0A140LIT1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc194A0A140LIT1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc194A0A140LIT1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc194A0A140LIT1 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.67■■□□□ 1.06
Ccdc194A0A140LIT1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ccdc194A0A140LIT1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.67■■□□□ 1.06
Ccdc194A0A140LIT1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc194A0A140LIT1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc194A0A140LIT1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc194A0A140LIT1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc194A0A140LIT1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc194A0A140LIT1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc194A0A140LIT1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc194A0A140LIT1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc194A0A140LIT1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc194A0A140LIT1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc194A0A140LIT1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ccdc194A0A140LIT1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc194A0A140LIT1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc194A0A140LIT1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc194A0A140LIT1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ccdc194A0A140LIT1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc194A0A140LIT1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc194A0A140LIT1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc194A0A140LIT1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ccdc194A0A140LIT1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc194A0A140LIT1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc194A0A140LIT1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc194A0A140LIT1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.64■■□□□ 1.05
Ccdc194A0A140LIT1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc194A0A140LIT1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc194A0A140LIT1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc194A0A140LIT1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.63■■□□□ 1.05
Ccdc194A0A140LIT1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc194A0A140LIT1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccdc194A0A140LIT1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc194A0A140LIT1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc194A0A140LIT1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc194A0A140LIT1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc194A0A140LIT1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc194A0A140LIT1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc194A0A140LIT1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc194A0A140LIT1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc194A0A140LIT1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc194A0A140LIT1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc194A0A140LIT1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc194A0A140LIT1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms