Protein–RNA interactions for Protein: A0A0B4J1J4

Ighv9-2, Immunoglobulin heavy variable V9-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-2A0A0B4J1J4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv9-2A0A0B4J1J4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv9-2A0A0B4J1J4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv9-2A0A0B4J1J4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.33■□□□□ 0.52
Ighv9-2A0A0B4J1J4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.33■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Gm14523-201ENSMUST00000117260 558 ntBASIC18.31■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.31■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.31■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv9-2A0A0B4J1J4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.31■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ighv9-2A0A0B4J1J4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.3■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.29■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Gm27502-201ENSMUST00000183495 199 ntBASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv9-2A0A0B4J1J4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.27■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Gm7332-201ENSMUST00000118351 454 ntBASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.24■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv9-2A0A0B4J1J4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv9-2A0A0B4J1J4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms