Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Igkv5-45A0A0B4J1J1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Igkv5-45A0A0B4J1J1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Gm5812-201ENSMUST00000061073 957 ntBASIC22.79■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.78■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Igkv5-45A0A0B4J1J1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.77■■□□□ 1.24
Igkv5-45A0A0B4J1J1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Igkv5-45A0A0B4J1J1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.76■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Igkv5-45A0A0B4J1J1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Igkv5-45A0A0B4J1J1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.75■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.72■■□□□ 1.23
Igkv5-45A0A0B4J1J1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.71■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.71■■□□□ 1.23
Igkv5-45A0A0B4J1J1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv5-45A0A0B4J1J1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.69■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.68■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.68■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.65■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Igkv5-45A0A0B4J1J1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Igkv5-45A0A0B4J1J1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.62■■□□□ 1.21
Igkv5-45A0A0B4J1J1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.62■■□□□ 1.21
Igkv5-45A0A0B4J1J1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms