Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv20A0A0B4J1H5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv20A0A0B4J1H5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Trbv20A0A0B4J1H5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv20A0A0B4J1H5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv20A0A0B4J1H5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv20A0A0B4J1H5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv20A0A0B4J1H5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv20A0A0B4J1H5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv20A0A0B4J1H5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv20A0A0B4J1H5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trbv20A0A0B4J1H5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv20A0A0B4J1H5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.64■□□□□ 0.73
Trbv20A0A0B4J1H5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv20A0A0B4J1H5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv20A0A0B4J1H5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv20A0A0B4J1H5 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.63■□□□□ 0.73
Trbv20A0A0B4J1H5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv20A0A0B4J1H5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trbv20A0A0B4J1H5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv20A0A0B4J1H5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv20A0A0B4J1H5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Trbv20A0A0B4J1H5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv20A0A0B4J1H5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv20A0A0B4J1H5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv20A0A0B4J1H5 Notumos-201ENSMUST00000151998 2659 ntBASIC19.61■□□□□ 0.73
Trbv20A0A0B4J1H5 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.61■□□□□ 0.73
Trbv20A0A0B4J1H5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv20A0A0B4J1H5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv20A0A0B4J1H5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv20A0A0B4J1H5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv20A0A0B4J1H5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv20A0A0B4J1H5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.61■□□□□ 0.73
Trbv20A0A0B4J1H5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv20A0A0B4J1H5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv20A0A0B4J1H5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv20A0A0B4J1H5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.6■□□□□ 0.73
Trbv20A0A0B4J1H5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.6■□□□□ 0.73
Trbv20A0A0B4J1H5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv20A0A0B4J1H5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.59■□□□□ 0.73
Trbv20A0A0B4J1H5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv20A0A0B4J1H5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv20A0A0B4J1H5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.59■□□□□ 0.73
Trbv20A0A0B4J1H5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.59■□□□□ 0.73
Trbv20A0A0B4J1H5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv20A0A0B4J1H5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trbv20A0A0B4J1H5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trbv20A0A0B4J1H5 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.58■□□□□ 0.72
Trbv20A0A0B4J1H5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv20A0A0B4J1H5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv20A0A0B4J1H5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv20A0A0B4J1H5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv20A0A0B4J1H5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv20A0A0B4J1H5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.58■□□□□ 0.72
Trbv20A0A0B4J1H5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv20A0A0B4J1H5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.57■□□□□ 0.72
Trbv20A0A0B4J1H5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv20A0A0B4J1H5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv20A0A0B4J1H5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv20A0A0B4J1H5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv20A0A0B4J1H5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv20A0A0B4J1H5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Trbv20A0A0B4J1H5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Gm22567-201ENSMUST00000175542 342 ntBASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv20A0A0B4J1H5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.54■□□□□ 0.72
Trbv20A0A0B4J1H5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv20A0A0B4J1H5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.54■□□□□ 0.72
Trbv20A0A0B4J1H5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv20A0A0B4J1H5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv20A0A0B4J1H5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trbv20A0A0B4J1H5 Gm45855-201ENSMUST00000212546 880 ntBASIC19.53■□□□□ 0.72
Trbv20A0A0B4J1H5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.53■□□□□ 0.72
Trbv20A0A0B4J1H5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv20A0A0B4J1H5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv20A0A0B4J1H5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trbv20A0A0B4J1H5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv20A0A0B4J1H5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv20A0A0B4J1H5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv20A0A0B4J1H5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Trbv20A0A0B4J1H5 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.52■□□□□ 0.72
Trbv20A0A0B4J1H5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv20A0A0B4J1H5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trbv20A0A0B4J1H5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv20A0A0B4J1H5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv20A0A0B4J1H5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.51■□□□□ 0.71
Trbv20A0A0B4J1H5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trbv20A0A0B4J1H5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trbv20A0A0B4J1H5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv20A0A0B4J1H5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Trbv20A0A0B4J1H5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv20A0A0B4J1H5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv20A0A0B4J1H5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms