Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb3S4R1G7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.76■□□□□ 0.75
H2afb3S4R1G7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb3S4R1G7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.76■□□□□ 0.75
H2afb3S4R1G7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb3S4R1G7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.76■□□□□ 0.75
H2afb3S4R1G7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb3S4R1G7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb3S4R1G7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb3S4R1G7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb3S4R1G7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb3S4R1G7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb3S4R1G7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
H2afb3S4R1G7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
H2afb3S4R1G7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afb3S4R1G7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.74■□□□□ 0.75
H2afb3S4R1G7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.73■□□□□ 0.75
H2afb3S4R1G7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb3S4R1G7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
H2afb3S4R1G7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.73■□□□□ 0.75
H2afb3S4R1G7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.72■□□□□ 0.75
H2afb3S4R1G7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb3S4R1G7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb3S4R1G7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
H2afb3S4R1G7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb3S4R1G7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb3S4R1G7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb3S4R1G7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb3S4R1G7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb3S4R1G7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.71■□□□□ 0.75
H2afb3S4R1G7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb3S4R1G7 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.7■□□□□ 0.74
H2afb3S4R1G7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
H2afb3S4R1G7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
H2afb3S4R1G7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb3S4R1G7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
H2afb3S4R1G7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb3S4R1G7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb3S4R1G7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
H2afb3S4R1G7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb3S4R1G7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb3S4R1G7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb3S4R1G7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb3S4R1G7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb3S4R1G7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Terc-201ENSMUST00000082862 423 ntBASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb3S4R1G7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
H2afb3S4R1G7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb3S4R1G7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb3S4R1G7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
H2afb3S4R1G7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.67■□□□□ 0.74
H2afb3S4R1G7 Gm45364-201ENSMUST00000210883 159 ntBASIC19.67■□□□□ 0.74
H2afb3S4R1G7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.67■□□□□ 0.74
H2afb3S4R1G7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb3S4R1G7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
H2afb3S4R1G7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
H2afb3S4R1G7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
H2afb3S4R1G7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.65■□□□□ 0.74
H2afb3S4R1G7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
H2afb3S4R1G7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H2afb3S4R1G7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb3S4R1G7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb3S4R1G7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb3S4R1G7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb3S4R1G7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb3S4R1G7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb3S4R1G7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.62■□□□□ 0.73
H2afb3S4R1G7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms