Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cdc45Q9Z1X9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.71■■□□□ 1.71
Cdc45Q9Z1X9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cdc45Q9Z1X9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cdc45Q9Z1X9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.7■■□□□ 1.71
Cdc45Q9Z1X9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Cdc45Q9Z1X9 Mir6538-201ENSMUST00000183713 110 ntBASIC25.7■■□□□ 1.7
Cdc45Q9Z1X9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Cdc45Q9Z1X9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.69■■□□□ 1.7
Cdc45Q9Z1X9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Cdc45Q9Z1X9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Cdc45Q9Z1X9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Cdc45Q9Z1X9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cdc45Q9Z1X9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cdc45Q9Z1X9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Cdc45Q9Z1X9 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.67■■□□□ 1.7
Cdc45Q9Z1X9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cdc45Q9Z1X9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Cdc45Q9Z1X9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Cdc45Q9Z1X9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Cdc45Q9Z1X9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cdc45Q9Z1X9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Cdc45Q9Z1X9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cdc45Q9Z1X9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cdc45Q9Z1X9 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.65■■□□□ 1.7
Cdc45Q9Z1X9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cdc45Q9Z1X9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cdc45Q9Z1X9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Cdc45Q9Z1X9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.64■■□□□ 1.7
Cdc45Q9Z1X9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cdc45Q9Z1X9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
Cdc45Q9Z1X9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Cdc45Q9Z1X9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Cdc45Q9Z1X9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.64■■□□□ 1.69
Cdc45Q9Z1X9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cdc45Q9Z1X9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cdc45Q9Z1X9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cdc45Q9Z1X9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.63■■□□□ 1.69
Cdc45Q9Z1X9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Cdc45Q9Z1X9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cdc45Q9Z1X9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cdc45Q9Z1X9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Cdc45Q9Z1X9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Cdc45Q9Z1X9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cdc45Q9Z1X9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.59■■□□□ 1.69
Cdc45Q9Z1X9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cdc45Q9Z1X9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Cdc45Q9Z1X9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Cdc45Q9Z1X9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cdc45Q9Z1X9 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.58■■□□□ 1.69
Cdc45Q9Z1X9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdc45Q9Z1X9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cdc45Q9Z1X9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdc45Q9Z1X9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdc45Q9Z1X9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.57■■□□□ 1.68
Cdc45Q9Z1X9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Cdc45Q9Z1X9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.56■■□□□ 1.68
Cdc45Q9Z1X9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cdc45Q9Z1X9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cdc45Q9Z1X9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cdc45Q9Z1X9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Cdc45Q9Z1X9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cdc45Q9Z1X9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cdc45Q9Z1X9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cdc45Q9Z1X9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.54■■□□□ 1.68
Cdc45Q9Z1X9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cdc45Q9Z1X9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.54■■□□□ 1.68
Cdc45Q9Z1X9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Cdc45Q9Z1X9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cdc45Q9Z1X9 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.53■■□□□ 1.68
Cdc45Q9Z1X9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Cdc45Q9Z1X9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cdc45Q9Z1X9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Cdc45Q9Z1X9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.52■■□□□ 1.68
Cdc45Q9Z1X9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdc45Q9Z1X9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Cdc45Q9Z1X9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdc45Q9Z1X9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
Cdc45Q9Z1X9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.51■■□□□ 1.67
Cdc45Q9Z1X9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
Cdc45Q9Z1X9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Cdc45Q9Z1X9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cdc45Q9Z1X9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Cdc45Q9Z1X9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cdc45Q9Z1X9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdc45Q9Z1X9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdc45Q9Z1X9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cdc45Q9Z1X9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cdc45Q9Z1X9 Gm14523-201ENSMUST00000117260 558 ntBASIC25.49■■□□□ 1.67
Cdc45Q9Z1X9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cdc45Q9Z1X9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cdc45Q9Z1X9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cdc45Q9Z1X9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cdc45Q9Z1X9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cdc45Q9Z1X9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cdc45Q9Z1X9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cdc45Q9Z1X9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cdc45Q9Z1X9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Cdc45Q9Z1X9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC25.48■■□□□ 1.67
Cdc45Q9Z1X9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC25.47■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms