Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.04■■□□□ 1.44
Nr1h3Q9Z0Y9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.04■■□□□ 1.44
Nr1h3Q9Z0Y9 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.04■■□□□ 1.44
Nr1h3Q9Z0Y9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Nr1h3Q9Z0Y9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.04■■□□□ 1.44
Nr1h3Q9Z0Y9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Nr1h3Q9Z0Y9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Nr1h3Q9Z0Y9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Nr1h3Q9Z0Y9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1h3Q9Z0Y9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1h3Q9Z0Y9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.02■■□□□ 1.44
Nr1h3Q9Z0Y9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.02■■□□□ 1.44
Nr1h3Q9Z0Y9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.02■■□□□ 1.44
Nr1h3Q9Z0Y9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.02■■□□□ 1.44
Nr1h3Q9Z0Y9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1h3Q9Z0Y9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1h3Q9Z0Y9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nr1h3Q9Z0Y9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Nr1h3Q9Z0Y9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24■■□□□ 1.43
Nr1h3Q9Z0Y9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Nr1h3Q9Z0Y9 Rps24-207ENSMUST00000224568 714 ntBASIC24■■□□□ 1.43
Nr1h3Q9Z0Y9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Nr1h3Q9Z0Y9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24■■□□□ 1.43
Nr1h3Q9Z0Y9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Nr1h3Q9Z0Y9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Nr1h3Q9Z0Y9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nr1h3Q9Z0Y9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nr1h3Q9Z0Y9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nr1h3Q9Z0Y9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.99■■□□□ 1.43
Nr1h3Q9Z0Y9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Nr1h3Q9Z0Y9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nr1h3Q9Z0Y9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nr1h3Q9Z0Y9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nr1h3Q9Z0Y9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Nr1h3Q9Z0Y9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Nr1h3Q9Z0Y9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nr1h3Q9Z0Y9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Nr1h3Q9Z0Y9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nr1h3Q9Z0Y9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Nr1h3Q9Z0Y9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.95■■□□□ 1.42
Nr1h3Q9Z0Y9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Nr1h3Q9Z0Y9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Nr1h3Q9Z0Y9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.95■■□□□ 1.42
Nr1h3Q9Z0Y9 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.95■■□□□ 1.42
Nr1h3Q9Z0Y9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Nr1h3Q9Z0Y9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.94■■□□□ 1.42
Nr1h3Q9Z0Y9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nr1h3Q9Z0Y9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Nr1h3Q9Z0Y9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1h3Q9Z0Y9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1h3Q9Z0Y9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1h3Q9Z0Y9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1h3Q9Z0Y9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1h3Q9Z0Y9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1h3Q9Z0Y9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.91■■□□□ 1.42
Nr1h3Q9Z0Y9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Nr1h3Q9Z0Y9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Nr1h3Q9Z0Y9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Nr1h3Q9Z0Y9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1h3Q9Z0Y9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1h3Q9Z0Y9 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.9■■□□□ 1.42
Nr1h3Q9Z0Y9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Nr1h3Q9Z0Y9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1h3Q9Z0Y9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Nr1h3Q9Z0Y9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Nr1h3Q9Z0Y9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Nr1h3Q9Z0Y9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Nr1h3Q9Z0Y9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Nr1h3Q9Z0Y9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Nr1h3Q9Z0Y9 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.88■■□□□ 1.41
Nr1h3Q9Z0Y9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Nr1h3Q9Z0Y9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Nr1h3Q9Z0Y9 Gm45102-201ENSMUST00000207427 857 ntBASIC23.88■■□□□ 1.41
Nr1h3Q9Z0Y9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Nr1h3Q9Z0Y9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
Nr1h3Q9Z0Y9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Nr1h3Q9Z0Y9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Nr1h3Q9Z0Y9 Gm15039-201ENSMUST00000118914 875 ntBASIC23.87■■□□□ 1.41
Nr1h3Q9Z0Y9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nr1h3Q9Z0Y9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nr1h3Q9Z0Y9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nr1h3Q9Z0Y9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.87■■□□□ 1.41
Nr1h3Q9Z0Y9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Nr1h3Q9Z0Y9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms