Protein–RNA interactions for Protein: Q9CQX0

Otub2, Ubiquitin thioesterase OTUB2, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub2Q9CQX0 Gm13238-201ENSMUST00000117655 780 ntBASIC21.5■■□□□ 1.03
Otub2Q9CQX0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Otub2Q9CQX0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Otub2Q9CQX0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Otub2Q9CQX0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Otub2Q9CQX0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Otub2Q9CQX0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.48■■□□□ 1.03
Otub2Q9CQX0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.48■■□□□ 1.03
Otub2Q9CQX0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Otub2Q9CQX0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Otub2Q9CQX0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Otub2Q9CQX0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.47■■□□□ 1.03
Otub2Q9CQX0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Otub2Q9CQX0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Otub2Q9CQX0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Otub2Q9CQX0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Otub2Q9CQX0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Otub2Q9CQX0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Otub2Q9CQX0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.45■■□□□ 1.02
Otub2Q9CQX0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Otub2Q9CQX0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Otub2Q9CQX0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Otub2Q9CQX0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Otub2Q9CQX0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Otub2Q9CQX0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Otub2Q9CQX0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.44■■□□□ 1.02
Otub2Q9CQX0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.44■■□□□ 1.02
Otub2Q9CQX0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Otub2Q9CQX0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Otub2Q9CQX0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Otub2Q9CQX0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Otub2Q9CQX0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Otub2Q9CQX0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Otub2Q9CQX0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Otub2Q9CQX0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Otub2Q9CQX0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Otub2Q9CQX0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Otub2Q9CQX0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Otub2Q9CQX0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Otub2Q9CQX0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Otub2Q9CQX0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.41■■□□□ 1.02
Otub2Q9CQX0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Otub2Q9CQX0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Otub2Q9CQX0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.41■■□□□ 1.02
Otub2Q9CQX0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Otub2Q9CQX0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.4■■□□□ 1.02
Otub2Q9CQX0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Otub2Q9CQX0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Otub2Q9CQX0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Otub2Q9CQX0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Otub2Q9CQX0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.39■■□□□ 1.01
Otub2Q9CQX0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.39■■□□□ 1.01
Otub2Q9CQX0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Otub2Q9CQX0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.38■■□□□ 1.01
Otub2Q9CQX0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Otub2Q9CQX0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.38■■□□□ 1.01
Otub2Q9CQX0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Otub2Q9CQX0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Otub2Q9CQX0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Otub2Q9CQX0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Otub2Q9CQX0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.37■■□□□ 1.01
Otub2Q9CQX0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Otub2Q9CQX0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Otub2Q9CQX0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Otub2Q9CQX0 Gm15820-201ENSMUST00000201566 728 ntBASIC21.37■■□□□ 1.01
Otub2Q9CQX0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.37■■□□□ 1.01
Otub2Q9CQX0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Otub2Q9CQX0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Otub2Q9CQX0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Otub2Q9CQX0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Otub2Q9CQX0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Otub2Q9CQX0 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.35■■□□□ 1.01
Otub2Q9CQX0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.35■■□□□ 1.01
Otub2Q9CQX0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Otub2Q9CQX0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Otub2Q9CQX0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Otub2Q9CQX0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Otub2Q9CQX0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Otub2Q9CQX0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Otub2Q9CQX0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Otub2Q9CQX0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Otub2Q9CQX0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Otub2Q9CQX0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.32■■□□□ 1
Otub2Q9CQX0 Gm22567-201ENSMUST00000175542 342 ntBASIC21.32■■□□□ 1
Otub2Q9CQX0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.32■■□□□ 1
Otub2Q9CQX0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
Otub2Q9CQX0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.32■■□□□ 1
Otub2Q9CQX0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Otub2Q9CQX0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Otub2Q9CQX0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.31■■□□□ 1
Otub2Q9CQX0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms