Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H1fooQ8VIK3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H1fooQ8VIK3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
H1fooQ8VIK3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.41■□□□□ 0.54
H1fooQ8VIK3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H1fooQ8VIK3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
H1fooQ8VIK3 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.41■□□□□ 0.54
H1fooQ8VIK3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
H1fooQ8VIK3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
H1fooQ8VIK3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H1fooQ8VIK3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H1fooQ8VIK3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
H1fooQ8VIK3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.4■□□□□ 0.54
H1fooQ8VIK3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H1fooQ8VIK3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H1fooQ8VIK3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.4■□□□□ 0.54
H1fooQ8VIK3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H1fooQ8VIK3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
H1fooQ8VIK3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H1fooQ8VIK3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
H1fooQ8VIK3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H1fooQ8VIK3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
H1fooQ8VIK3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
H1fooQ8VIK3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H1fooQ8VIK3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H1fooQ8VIK3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H1fooQ8VIK3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.38■□□□□ 0.53
H1fooQ8VIK3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H1fooQ8VIK3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H1fooQ8VIK3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
H1fooQ8VIK3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
H1fooQ8VIK3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.37■□□□□ 0.53
H1fooQ8VIK3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H1fooQ8VIK3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H1fooQ8VIK3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
H1fooQ8VIK3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H1fooQ8VIK3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.37■□□□□ 0.53
H1fooQ8VIK3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.36■□□□□ 0.53
H1fooQ8VIK3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
H1fooQ8VIK3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H1fooQ8VIK3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.36■□□□□ 0.53
H1fooQ8VIK3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H1fooQ8VIK3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fooQ8VIK3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.34■□□□□ 0.53
H1fooQ8VIK3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
H1fooQ8VIK3 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.33■□□□□ 0.53
H1fooQ8VIK3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.33■□□□□ 0.53
H1fooQ8VIK3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
H1fooQ8VIK3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.33■□□□□ 0.53
H1fooQ8VIK3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
H1fooQ8VIK3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.33■□□□□ 0.52
H1fooQ8VIK3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H1fooQ8VIK3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
H1fooQ8VIK3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H1fooQ8VIK3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H1fooQ8VIK3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fooQ8VIK3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fooQ8VIK3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fooQ8VIK3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
H1fooQ8VIK3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fooQ8VIK3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H1fooQ8VIK3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H1fooQ8VIK3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H1fooQ8VIK3 Scarna2-201ENSMUST00000157560 414 ntBASIC18.31■□□□□ 0.52
H1fooQ8VIK3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H1fooQ8VIK3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
H1fooQ8VIK3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
H1fooQ8VIK3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fooQ8VIK3 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.3■□□□□ 0.52
H1fooQ8VIK3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms