Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rfc3Q8R323 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rfc3Q8R323 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.28■□□□□ 0.84
Rfc3Q8R323 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc3Q8R323 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rfc3Q8R323 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfc3Q8R323 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfc3Q8R323 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Rfc3Q8R323 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rfc3Q8R323 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rfc3Q8R323 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rfc3Q8R323 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rfc3Q8R323 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc3Q8R323 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.26■□□□□ 0.83
Rfc3Q8R323 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc3Q8R323 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc3Q8R323 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc3Q8R323 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc3Q8R323 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc3Q8R323 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc3Q8R323 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc3Q8R323 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.25■□□□□ 0.83
Rfc3Q8R323 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc3Q8R323 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Rfc3Q8R323 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc3Q8R323 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc3Q8R323 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc3Q8R323 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc3Q8R323 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc3Q8R323 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc3Q8R323 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc3Q8R323 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc3Q8R323 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc3Q8R323 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc3Q8R323 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc3Q8R323 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc3Q8R323 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc3Q8R323 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc3Q8R323 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc3Q8R323 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.21■□□□□ 0.83
Rfc3Q8R323 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc3Q8R323 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.21■□□□□ 0.83
Rfc3Q8R323 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.21■□□□□ 0.83
Rfc3Q8R323 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.21■□□□□ 0.83
Rfc3Q8R323 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Rfc3Q8R323 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rfc3Q8R323 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rfc3Q8R323 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc3Q8R323 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc3Q8R323 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rfc3Q8R323 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc3Q8R323 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc3Q8R323 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc3Q8R323 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc3Q8R323 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc3Q8R323 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc3Q8R323 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc3Q8R323 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rfc3Q8R323 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc3Q8R323 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc3Q8R323 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc3Q8R323 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc3Q8R323 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc3Q8R323 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc3Q8R323 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc3Q8R323 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc3Q8R323 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc3Q8R323 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc3Q8R323 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc3Q8R323 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Rfc3Q8R323 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc3Q8R323 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.16■□□□□ 0.82
Rfc3Q8R323 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc3Q8R323 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfc3Q8R323 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.15■□□□□ 0.82
Rfc3Q8R323 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.15■□□□□ 0.82
Rfc3Q8R323 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.15■□□□□ 0.82
Rfc3Q8R323 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfc3Q8R323 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfc3Q8R323 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc3Q8R323 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc3Q8R323 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc3Q8R323 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc3Q8R323 Gm5921-201ENSMUST00000075898 882 ntBASIC20.14■□□□□ 0.81
Rfc3Q8R323 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rfc3Q8R323 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc3Q8R323 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc3Q8R323 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc3Q8R323 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc3Q8R323 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc3Q8R323 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rfc3Q8R323 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rfc3Q8R323 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rfc3Q8R323 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc3Q8R323 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc3Q8R323 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc3Q8R323 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.12■□□□□ 0.81
Rfc3Q8R323 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfc3Q8R323 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfc3Q8R323 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms