Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trim31Q8R0K2 Cap2-205ENSMUST00000225824 1634 ntBASIC21.41■■□□□ 1.02
Trim31Q8R0K2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim31Q8R0K2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim31Q8R0K2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim31Q8R0K2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim31Q8R0K2 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.39■■□□□ 1.02
Trim31Q8R0K2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim31Q8R0K2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trim31Q8R0K2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Gm27502-201ENSMUST00000183495 199 ntBASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Gm12366-201ENSMUST00000121722 873 ntBASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Gm5786-201ENSMUST00000085368 882 ntBASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim31Q8R0K2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Trim31Q8R0K2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim31Q8R0K2 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.32■■□□□ 1
Trim31Q8R0K2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim31Q8R0K2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim31Q8R0K2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.31■■□□□ 1
Trim31Q8R0K2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.31■■□□□ 1
Trim31Q8R0K2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.31■■□□□ 1
Trim31Q8R0K2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim31Q8R0K2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim31Q8R0K2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms