Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim31Q8R0K2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim31Q8R0K2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trim31Q8R0K2 Cap2-205ENSMUST00000225824 1634 ntBASIC21.41■■□□□ 1.02
Trim31Q8R0K2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim31Q8R0K2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim31Q8R0K2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim31Q8R0K2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim31Q8R0K2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim31Q8R0K2 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.39■■□□□ 1.02
Trim31Q8R0K2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim31Q8R0K2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trim31Q8R0K2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim31Q8R0K2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Gm27502-201ENSMUST00000183495 199 ntBASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim31Q8R0K2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Trim31Q8R0K2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Gm12366-201ENSMUST00000121722 873 ntBASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Gm5786-201ENSMUST00000085368 882 ntBASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim31Q8R0K2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim31Q8R0K2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim31Q8R0K2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim31Q8R0K2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim31Q8R0K2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Trim31Q8R0K2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim31Q8R0K2 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.32■■□□□ 1
Trim31Q8R0K2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim31Q8R0K2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim31Q8R0K2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.31■■□□□ 1
Trim31Q8R0K2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.31■■□□□ 1
Trim31Q8R0K2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.31■■□□□ 1
Trim31Q8R0K2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim31Q8R0K2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim31Q8R0K2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms