Protein–RNA interactions for Protein: Q8K3M1

Rdh16f2, Cis-retinol/3alpha hydroxysterol short-chain dehydrogenase-like protein, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f2Q8K3M1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.87■□□□□ 0.93
Rdh16f2Q8K3M1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rdh16f2Q8K3M1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rdh16f2Q8K3M1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rdh16f2Q8K3M1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 Gm10232-201ENSMUST00000089221 720 ntBASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.86■□□□□ 0.93
Rdh16f2Q8K3M1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rdh16f2Q8K3M1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rdh16f2Q8K3M1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rdh16f2Q8K3M1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rdh16f2Q8K3M1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rdh16f2Q8K3M1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.84■□□□□ 0.93
Rdh16f2Q8K3M1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.84■□□□□ 0.93
Rdh16f2Q8K3M1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rdh16f2Q8K3M1 Gm9959-201ENSMUST00000068277 390 ntBASIC20.84■□□□□ 0.93
Rdh16f2Q8K3M1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.84■□□□□ 0.93
Rdh16f2Q8K3M1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.83■□□□□ 0.93
Rdh16f2Q8K3M1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.83■□□□□ 0.93
Rdh16f2Q8K3M1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rdh16f2Q8K3M1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rdh16f2Q8K3M1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rdh16f2Q8K3M1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rdh16f2Q8K3M1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rdh16f2Q8K3M1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.82■□□□□ 0.92
Rdh16f2Q8K3M1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rdh16f2Q8K3M1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rdh16f2Q8K3M1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rdh16f2Q8K3M1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rdh16f2Q8K3M1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rdh16f2Q8K3M1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rdh16f2Q8K3M1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rdh16f2Q8K3M1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rdh16f2Q8K3M1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.81■□□□□ 0.92
Rdh16f2Q8K3M1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh16f2Q8K3M1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh16f2Q8K3M1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.8■□□□□ 0.92
Rdh16f2Q8K3M1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rdh16f2Q8K3M1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh16f2Q8K3M1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rdh16f2Q8K3M1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rdh16f2Q8K3M1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.79■□□□□ 0.92
Rdh16f2Q8K3M1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rdh16f2Q8K3M1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Rdh16f2Q8K3M1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rdh16f2Q8K3M1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rdh16f2Q8K3M1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rdh16f2Q8K3M1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rdh16f2Q8K3M1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rdh16f2Q8K3M1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rdh16f2Q8K3M1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.77■□□□□ 0.92
Rdh16f2Q8K3M1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rdh16f2Q8K3M1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rdh16f2Q8K3M1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rdh16f2Q8K3M1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.77■□□□□ 0.91
Rdh16f2Q8K3M1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.76■□□□□ 0.91
Rdh16f2Q8K3M1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rdh16f2Q8K3M1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rdh16f2Q8K3M1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh16f2Q8K3M1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Rdh16f2Q8K3M1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rdh16f2Q8K3M1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rdh16f2Q8K3M1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rdh16f2Q8K3M1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.74■□□□□ 0.91
Rdh16f2Q8K3M1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh16f2Q8K3M1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh16f2Q8K3M1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh16f2Q8K3M1 Etf1-202ENSMUST00000180351 108 ntBASIC20.73■□□□□ 0.91
Rdh16f2Q8K3M1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh16f2Q8K3M1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh16f2Q8K3M1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rdh16f2Q8K3M1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.72■□□□□ 0.91
Rdh16f2Q8K3M1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.72■□□□□ 0.91
Rdh16f2Q8K3M1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Rdh16f2Q8K3M1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh16f2Q8K3M1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rdh16f2Q8K3M1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh16f2Q8K3M1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh16f2Q8K3M1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rdh16f2Q8K3M1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh16f2Q8K3M1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh16f2Q8K3M1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Rdh16f2Q8K3M1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh16f2Q8K3M1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh16f2Q8K3M1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh16f2Q8K3M1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms