Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Nckap1lQ8K1X4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1lQ8K1X4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1lQ8K1X4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1lQ8K1X4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1lQ8K1X4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nckap1lQ8K1X4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nckap1lQ8K1X4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nckap1lQ8K1X4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nckap1lQ8K1X4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.37■■□□□ 1.01
Nckap1lQ8K1X4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Nckap1lQ8K1X4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nckap1lQ8K1X4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.37■■□□□ 1.01
Nckap1lQ8K1X4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nckap1lQ8K1X4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nckap1lQ8K1X4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1lQ8K1X4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.35■■□□□ 1.01
Nckap1lQ8K1X4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nckap1lQ8K1X4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nckap1lQ8K1X4 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.35■■□□□ 1.01
Nckap1lQ8K1X4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nckap1lQ8K1X4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nckap1lQ8K1X4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.35■■□□□ 1.01
Nckap1lQ8K1X4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nckap1lQ8K1X4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nckap1lQ8K1X4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nckap1lQ8K1X4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nckap1lQ8K1X4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Nckap1lQ8K1X4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nckap1lQ8K1X4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nckap1lQ8K1X4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nckap1lQ8K1X4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.33■■□□□ 1.01
Nckap1lQ8K1X4 Gm6311-201ENSMUST00000073790 878 ntBASIC21.33■■□□□ 1.01
Nckap1lQ8K1X4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nckap1lQ8K1X4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nckap1lQ8K1X4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nckap1lQ8K1X4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Nckap1lQ8K1X4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.31■■□□□ 1
Nckap1lQ8K1X4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.31■■□□□ 1
Nckap1lQ8K1X4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nckap1lQ8K1X4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nckap1lQ8K1X4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.31■■□□□ 1
Nckap1lQ8K1X4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nckap1lQ8K1X4 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.3■■□□□ 1
Nckap1lQ8K1X4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Nckap1lQ8K1X4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nckap1lQ8K1X4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.3■■□□□ 1
Nckap1lQ8K1X4 Terc-201ENSMUST00000082862 423 ntBASIC21.3■■□□□ 1
Nckap1lQ8K1X4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nckap1lQ8K1X4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nckap1lQ8K1X4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nckap1lQ8K1X4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nckap1lQ8K1X4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nckap1lQ8K1X4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nckap1lQ8K1X4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nckap1lQ8K1X4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.29■■□□□ 1
Nckap1lQ8K1X4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nckap1lQ8K1X4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Nckap1lQ8K1X4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1lQ8K1X4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Nckap1lQ8K1X4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1lQ8K1X4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1lQ8K1X4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1lQ8K1X4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.28■■□□□ 1
Nckap1lQ8K1X4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1lQ8K1X4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1lQ8K1X4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nckap1lQ8K1X4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Nckap1lQ8K1X4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.27■■□□□ 1
Nckap1lQ8K1X4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nckap1lQ8K1X4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Nckap1lQ8K1X4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nckap1lQ8K1X4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nckap1lQ8K1X4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nckap1lQ8K1X4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.25■□□□□ 0.99
Nckap1lQ8K1X4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nckap1lQ8K1X4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nckap1lQ8K1X4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nckap1lQ8K1X4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nckap1lQ8K1X4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.24■□□□□ 0.99
Nckap1lQ8K1X4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms