Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Brat1Q8C3R1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Brat1Q8C3R1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Brat1Q8C3R1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Brat1Q8C3R1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.38■■□□□ 1.33
Brat1Q8C3R1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Brat1Q8C3R1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Brat1Q8C3R1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Brat1Q8C3R1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Brat1Q8C3R1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Brat1Q8C3R1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Brat1Q8C3R1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Brat1Q8C3R1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Brat1Q8C3R1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Brat1Q8C3R1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Brat1Q8C3R1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Brat1Q8C3R1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Brat1Q8C3R1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Brat1Q8C3R1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Brat1Q8C3R1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Brat1Q8C3R1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Brat1Q8C3R1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Brat1Q8C3R1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Brat1Q8C3R1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Brat1Q8C3R1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Brat1Q8C3R1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Brat1Q8C3R1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Brat1Q8C3R1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Brat1Q8C3R1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Brat1Q8C3R1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Brat1Q8C3R1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Brat1Q8C3R1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Brat1Q8C3R1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Brat1Q8C3R1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Brat1Q8C3R1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Brat1Q8C3R1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
Brat1Q8C3R1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Brat1Q8C3R1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Brat1Q8C3R1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.31■■□□□ 1.32
Brat1Q8C3R1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Brat1Q8C3R1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Brat1Q8C3R1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Brat1Q8C3R1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Brat1Q8C3R1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
Brat1Q8C3R1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Brat1Q8C3R1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Brat1Q8C3R1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Brat1Q8C3R1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Brat1Q8C3R1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.3■■□□□ 1.32
Brat1Q8C3R1 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.3■■□□□ 1.32
Brat1Q8C3R1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Brat1Q8C3R1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Brat1Q8C3R1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Brat1Q8C3R1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Brat1Q8C3R1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Brat1Q8C3R1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Brat1Q8C3R1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Brat1Q8C3R1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Brat1Q8C3R1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Brat1Q8C3R1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Brat1Q8C3R1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Brat1Q8C3R1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Brat1Q8C3R1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Brat1Q8C3R1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Brat1Q8C3R1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Brat1Q8C3R1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Brat1Q8C3R1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Brat1Q8C3R1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Brat1Q8C3R1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Brat1Q8C3R1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Brat1Q8C3R1 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.26■■□□□ 1.31
Brat1Q8C3R1 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Brat1Q8C3R1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Brat1Q8C3R1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Brat1Q8C3R1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Brat1Q8C3R1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Brat1Q8C3R1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Brat1Q8C3R1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Brat1Q8C3R1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Brat1Q8C3R1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.23■■□□□ 1.31
Brat1Q8C3R1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Brat1Q8C3R1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Brat1Q8C3R1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.23■■□□□ 1.31
Brat1Q8C3R1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Brat1Q8C3R1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Brat1Q8C3R1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Brat1Q8C3R1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Brat1Q8C3R1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Brat1Q8C3R1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Brat1Q8C3R1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms