Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smim4Q8C1Q6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smim4Q8C1Q6 Gm11599-201ENSMUST00000118720 878 ntBASIC18.43■□□□□ 0.54
Smim4Q8C1Q6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smim4Q8C1Q6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smim4Q8C1Q6 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.43■□□□□ 0.54
Smim4Q8C1Q6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smim4Q8C1Q6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smim4Q8C1Q6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smim4Q8C1Q6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.42■□□□□ 0.54
Smim4Q8C1Q6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smim4Q8C1Q6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.41■□□□□ 0.54
Smim4Q8C1Q6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.41■□□□□ 0.54
Smim4Q8C1Q6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim4Q8C1Q6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smim4Q8C1Q6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smim4Q8C1Q6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim4Q8C1Q6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smim4Q8C1Q6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Smim4Q8C1Q6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.4■□□□□ 0.54
Smim4Q8C1Q6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim4Q8C1Q6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smim4Q8C1Q6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim4Q8C1Q6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim4Q8C1Q6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smim4Q8C1Q6 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.39■□□□□ 0.53
Smim4Q8C1Q6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim4Q8C1Q6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim4Q8C1Q6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim4Q8C1Q6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim4Q8C1Q6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim4Q8C1Q6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smim4Q8C1Q6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smim4Q8C1Q6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim4Q8C1Q6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Terc-201ENSMUST00000082862 423 ntBASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smim4Q8C1Q6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 Gm45364-201ENSMUST00000210883 159 ntBASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim4Q8C1Q6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim4Q8C1Q6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim4Q8C1Q6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smim4Q8C1Q6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim4Q8C1Q6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smim4Q8C1Q6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim4Q8C1Q6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smim4Q8C1Q6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim4Q8C1Q6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smim4Q8C1Q6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smim4Q8C1Q6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smim4Q8C1Q6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.33■□□□□ 0.53
Smim4Q8C1Q6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smim4Q8C1Q6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smim4Q8C1Q6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Smim4Q8C1Q6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.32■□□□□ 0.52
Smim4Q8C1Q6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Smim4Q8C1Q6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim4Q8C1Q6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Smim4Q8C1Q6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms