Protein–RNA interactions for Protein: Q8BYK8

Zc3h6, Zinc finger CCCH domain-containing protein 6, mousemouse

Predictions only

Length 1,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h6Q8BYK8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h6Q8BYK8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h6Q8BYK8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Zc3h6Q8BYK8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h6Q8BYK8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h6Q8BYK8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.41■■□□□ 1.5
Zc3h6Q8BYK8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Zc3h6Q8BYK8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Zc3h6Q8BYK8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Zc3h6Q8BYK8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
Zc3h6Q8BYK8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Zc3h6Q8BYK8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Zc3h6Q8BYK8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zc3h6Q8BYK8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.4■■□□□ 1.5
Zc3h6Q8BYK8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zc3h6Q8BYK8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Zc3h6Q8BYK8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Zc3h6Q8BYK8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Zc3h6Q8BYK8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Zc3h6Q8BYK8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Zc3h6Q8BYK8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Zc3h6Q8BYK8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Zc3h6Q8BYK8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.38■■□□□ 1.49
Zc3h6Q8BYK8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.38■■□□□ 1.49
Zc3h6Q8BYK8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zc3h6Q8BYK8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.37■■□□□ 1.49
Zc3h6Q8BYK8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Zc3h6Q8BYK8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Zc3h6Q8BYK8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.36■■□□□ 1.49
Zc3h6Q8BYK8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.36■■□□□ 1.49
Zc3h6Q8BYK8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h6Q8BYK8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h6Q8BYK8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h6Q8BYK8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Zc3h6Q8BYK8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h6Q8BYK8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.35■■□□□ 1.49
Zc3h6Q8BYK8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Zc3h6Q8BYK8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Zc3h6Q8BYK8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Zc3h6Q8BYK8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.34■■□□□ 1.49
Zc3h6Q8BYK8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Zc3h6Q8BYK8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Zc3h6Q8BYK8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Zc3h6Q8BYK8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Zc3h6Q8BYK8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Zc3h6Q8BYK8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zc3h6Q8BYK8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.32■■□□□ 1.48
Zc3h6Q8BYK8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Zc3h6Q8BYK8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zc3h6Q8BYK8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Zc3h6Q8BYK8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zc3h6Q8BYK8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Zc3h6Q8BYK8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.31■■□□□ 1.48
Zc3h6Q8BYK8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Zc3h6Q8BYK8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.31■■□□□ 1.48
Zc3h6Q8BYK8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Zc3h6Q8BYK8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Zc3h6Q8BYK8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.3■■□□□ 1.48
Zc3h6Q8BYK8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Zc3h6Q8BYK8 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.29■■□□□ 1.48
Zc3h6Q8BYK8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.29■■□□□ 1.48
Zc3h6Q8BYK8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Zc3h6Q8BYK8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.29■■□□□ 1.48
Zc3h6Q8BYK8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Zc3h6Q8BYK8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Zc3h6Q8BYK8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Zc3h6Q8BYK8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Zc3h6Q8BYK8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Zc3h6Q8BYK8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Zc3h6Q8BYK8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Zc3h6Q8BYK8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Zc3h6Q8BYK8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Zc3h6Q8BYK8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Zc3h6Q8BYK8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Zc3h6Q8BYK8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Zc3h6Q8BYK8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Zc3h6Q8BYK8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Zc3h6Q8BYK8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Zc3h6Q8BYK8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Zc3h6Q8BYK8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.26■■□□□ 1.47
Zc3h6Q8BYK8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Zc3h6Q8BYK8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Zc3h6Q8BYK8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h6Q8BYK8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h6Q8BYK8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Zc3h6Q8BYK8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h6Q8BYK8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h6Q8BYK8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h6Q8BYK8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h6Q8BYK8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h6Q8BYK8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zc3h6Q8BYK8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Zc3h6Q8BYK8 Gm10420-201ENSMUST00000121713 882 ntBASIC24.21■■□□□ 1.47
Zc3h6Q8BYK8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h6Q8BYK8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Zc3h6Q8BYK8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h6Q8BYK8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h6Q8BYK8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h6Q8BYK8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h6Q8BYK8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms