Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc5a7Q8BGY9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc5a7Q8BGY9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc5a7Q8BGY9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc5a7Q8BGY9 Gm24970-201ENSMUST00000175582 82 ntBASIC19.39■□□□□ 0.69
Slc5a7Q8BGY9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc5a7Q8BGY9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc5a7Q8BGY9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc5a7Q8BGY9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Slc5a7Q8BGY9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Slc5a7Q8BGY9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc5a7Q8BGY9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc5a7Q8BGY9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc5a7Q8BGY9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc5a7Q8BGY9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc5a7Q8BGY9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc5a7Q8BGY9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc5a7Q8BGY9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Slc5a7Q8BGY9 Zfp131-205ENSMUST00000223812 663 ntBASIC19.36■□□□□ 0.69
Slc5a7Q8BGY9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc5a7Q8BGY9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc5a7Q8BGY9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc5a7Q8BGY9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc5a7Q8BGY9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc5a7Q8BGY9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc5a7Q8BGY9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc5a7Q8BGY9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc5a7Q8BGY9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc5a7Q8BGY9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.34■□□□□ 0.69
Slc5a7Q8BGY9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc5a7Q8BGY9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc5a7Q8BGY9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc5a7Q8BGY9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc5a7Q8BGY9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc5a7Q8BGY9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.33■□□□□ 0.68
Slc5a7Q8BGY9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc5a7Q8BGY9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc5a7Q8BGY9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.33■□□□□ 0.68
Slc5a7Q8BGY9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc5a7Q8BGY9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc5a7Q8BGY9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc5a7Q8BGY9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc5a7Q8BGY9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc5a7Q8BGY9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.31■□□□□ 0.68
Slc5a7Q8BGY9 Gm9397-201ENSMUST00000200125 605 ntBASIC19.31■□□□□ 0.68
Slc5a7Q8BGY9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc5a7Q8BGY9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc5a7Q8BGY9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc5a7Q8BGY9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc5a7Q8BGY9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc5a7Q8BGY9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc5a7Q8BGY9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc5a7Q8BGY9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc5a7Q8BGY9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.3■□□□□ 0.68
Slc5a7Q8BGY9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc5a7Q8BGY9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slc5a7Q8BGY9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc5a7Q8BGY9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc5a7Q8BGY9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc5a7Q8BGY9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc5a7Q8BGY9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc5a7Q8BGY9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc5a7Q8BGY9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc5a7Q8BGY9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc5a7Q8BGY9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Slc5a7Q8BGY9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc5a7Q8BGY9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc5a7Q8BGY9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slc5a7Q8BGY9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc5a7Q8BGY9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Slc5a7Q8BGY9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc5a7Q8BGY9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.27■□□□□ 0.68
Slc5a7Q8BGY9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Slc5a7Q8BGY9 Notumos-201ENSMUST00000151998 2659 ntBASIC19.27■□□□□ 0.67
Slc5a7Q8BGY9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.27■□□□□ 0.67
Slc5a7Q8BGY9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc5a7Q8BGY9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slc5a7Q8BGY9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc5a7Q8BGY9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc5a7Q8BGY9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Slc5a7Q8BGY9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc5a7Q8BGY9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc5a7Q8BGY9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Slc5a7Q8BGY9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.24■□□□□ 0.67
Slc5a7Q8BGY9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc5a7Q8BGY9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc5a7Q8BGY9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc5a7Q8BGY9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms