Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pif1Q80SX8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.38■□□□□ 0.85
Pif1Q80SX8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pif1Q80SX8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pif1Q80SX8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pif1Q80SX8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pif1Q80SX8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.38■□□□□ 0.85
Pif1Q80SX8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pif1Q80SX8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pif1Q80SX8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pif1Q80SX8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pif1Q80SX8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pif1Q80SX8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pif1Q80SX8 Gm45102-201ENSMUST00000207427 857 ntBASIC20.37■□□□□ 0.85
Pif1Q80SX8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pif1Q80SX8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Pif1Q80SX8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pif1Q80SX8 Gm14117-201ENSMUST00000122417 843 ntBASIC20.36■□□□□ 0.85
Pif1Q80SX8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pif1Q80SX8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.36■□□□□ 0.85
Pif1Q80SX8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pif1Q80SX8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pif1Q80SX8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.36■□□□□ 0.85
Pif1Q80SX8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pif1Q80SX8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pif1Q80SX8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pif1Q80SX8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pif1Q80SX8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pif1Q80SX8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pif1Q80SX8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pif1Q80SX8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pif1Q80SX8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pif1Q80SX8 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.34■□□□□ 0.85
Pif1Q80SX8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pif1Q80SX8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pif1Q80SX8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pif1Q80SX8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pif1Q80SX8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pif1Q80SX8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pif1Q80SX8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.33■□□□□ 0.85
Pif1Q80SX8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pif1Q80SX8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pif1Q80SX8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pif1Q80SX8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pif1Q80SX8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pif1Q80SX8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pif1Q80SX8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pif1Q80SX8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pif1Q80SX8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pif1Q80SX8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pif1Q80SX8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pif1Q80SX8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pif1Q80SX8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pif1Q80SX8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pif1Q80SX8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pif1Q80SX8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pif1Q80SX8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.3■□□□□ 0.84
Pif1Q80SX8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pif1Q80SX8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pif1Q80SX8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.3■□□□□ 0.84
Pif1Q80SX8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pif1Q80SX8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pif1Q80SX8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pif1Q80SX8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Pif1Q80SX8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pif1Q80SX8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.29■□□□□ 0.84
Pif1Q80SX8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pif1Q80SX8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pif1Q80SX8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pif1Q80SX8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pif1Q80SX8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pif1Q80SX8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pif1Q80SX8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pif1Q80SX8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Pif1Q80SX8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pif1Q80SX8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Pif1Q80SX8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pif1Q80SX8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pif1Q80SX8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pif1Q80SX8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pif1Q80SX8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.26■□□□□ 0.83
Pif1Q80SX8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pif1Q80SX8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.26■□□□□ 0.83
Pif1Q80SX8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pif1Q80SX8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pif1Q80SX8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pif1Q80SX8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.25■□□□□ 0.83
Pif1Q80SX8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.25■□□□□ 0.83
Pif1Q80SX8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pif1Q80SX8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pif1Q80SX8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pif1Q80SX8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pif1Q80SX8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pif1Q80SX8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pif1Q80SX8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pif1Q80SX8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pif1Q80SX8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pif1Q80SX8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pif1Q80SX8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pif1Q80SX8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms