Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Prrt3Q6PE13 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.36■■□□□ 1.33
Prrt3Q6PE13 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Prrt3Q6PE13 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Prrt3Q6PE13 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Prrt3Q6PE13 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.35■■□□□ 1.33
Prrt3Q6PE13 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Prrt3Q6PE13 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prrt3Q6PE13 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prrt3Q6PE13 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Prrt3Q6PE13 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prrt3Q6PE13 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.34■■□□□ 1.33
Prrt3Q6PE13 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.34■■□□□ 1.33
Prrt3Q6PE13 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prrt3Q6PE13 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prrt3Q6PE13 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.33■■□□□ 1.33
Prrt3Q6PE13 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Prrt3Q6PE13 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.32■■□□□ 1.32
Prrt3Q6PE13 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.32■■□□□ 1.32
Prrt3Q6PE13 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.32■■□□□ 1.32
Prrt3Q6PE13 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prrt3Q6PE13 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prrt3Q6PE13 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Prrt3Q6PE13 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prrt3Q6PE13 Gm43566-201ENSMUST00000196851 808 ntBASIC23.31■■□□□ 1.32
Prrt3Q6PE13 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prrt3Q6PE13 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prrt3Q6PE13 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prrt3Q6PE13 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.3■■□□□ 1.32
Prrt3Q6PE13 Gm45444-201ENSMUST00000211394 898 ntBASIC23.3■■□□□ 1.32
Prrt3Q6PE13 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prrt3Q6PE13 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prrt3Q6PE13 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Prrt3Q6PE13 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prrt3Q6PE13 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.29■■□□□ 1.32
Prrt3Q6PE13 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prrt3Q6PE13 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prrt3Q6PE13 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.29■■□□□ 1.32
Prrt3Q6PE13 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prrt3Q6PE13 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Prrt3Q6PE13 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prrt3Q6PE13 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prrt3Q6PE13 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Prrt3Q6PE13 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Prrt3Q6PE13 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Prrt3Q6PE13 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Prrt3Q6PE13 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prrt3Q6PE13 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prrt3Q6PE13 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.27■■□□□ 1.32
Prrt3Q6PE13 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Gm22567-201ENSMUST00000175542 342 ntBASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prrt3Q6PE13 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Prrt3Q6PE13 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prrt3Q6PE13 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Prrt3Q6PE13 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prrt3Q6PE13 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prrt3Q6PE13 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prrt3Q6PE13 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.24■■□□□ 1.31
Prrt3Q6PE13 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Prrt3Q6PE13 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prrt3Q6PE13 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prrt3Q6PE13 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Prrt3Q6PE13 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Prrt3Q6PE13 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prrt3Q6PE13 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.23■■□□□ 1.31
Prrt3Q6PE13 Gm15820-201ENSMUST00000201566 728 ntBASIC23.23■■□□□ 1.31
Prrt3Q6PE13 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prrt3Q6PE13 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prrt3Q6PE13 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Prrt3Q6PE13 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prrt3Q6PE13 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Prrt3Q6PE13 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prrt3Q6PE13 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Prrt3Q6PE13 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.21■■□□□ 1.31
Prrt3Q6PE13 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Prrt3Q6PE13 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prrt3Q6PE13 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prrt3Q6PE13 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prrt3Q6PE13 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prrt3Q6PE13 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prrt3Q6PE13 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.19■■□□□ 1.3
Prrt3Q6PE13 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Prrt3Q6PE13 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Prrt3Q6PE13 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms