Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc1Q61572 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Foxc1Q61572 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc1Q61572 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc1Q61572 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc1Q61572 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc1Q61572 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc1Q61572 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc1Q61572 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc1Q61572 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.02■□□□□ 0.16
Foxc1Q61572 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc1Q61572 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Foxc1Q61572 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Foxc1Q61572 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Foxc1Q61572 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Foxc1Q61572 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxc1Q61572 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxc1Q61572 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Foxc1Q61572 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxc1Q61572 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxc1Q61572 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxc1Q61572 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Foxc1Q61572 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxc1Q61572 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Foxc1Q61572 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16■□□□□ 0.15
Foxc1Q61572 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16■□□□□ 0.15
Foxc1Q61572 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Foxc1Q61572 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16■□□□□ 0.15
Foxc1Q61572 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Foxc1Q61572 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.99■□□□□ 0.15
Foxc1Q61572 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Foxc1Q61572 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Foxc1Q61572 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Foxc1Q61572 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxc1Q61572 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.98■□□□□ 0.15
Foxc1Q61572 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxc1Q61572 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.98■□□□□ 0.15
Foxc1Q61572 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Foxc1Q61572 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Foxc1Q61572 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.97■□□□□ 0.15
Foxc1Q61572 Gm44428-201ENSMUST00000204474 874 ntBASIC15.97■□□□□ 0.15
Foxc1Q61572 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.97■□□□□ 0.15
Foxc1Q61572 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxc1Q61572 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxc1Q61572 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxc1Q61572 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Foxc1Q61572 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.96■□□□□ 0.15
Foxc1Q61572 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Foxc1Q61572 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Foxc1Q61572 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Foxc1Q61572 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.95■□□□□ 0.14
Foxc1Q61572 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxc1Q61572 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.95■□□□□ 0.14
Foxc1Q61572 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.95■□□□□ 0.14
Foxc1Q61572 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Foxc1Q61572 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxc1Q61572 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxc1Q61572 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxc1Q61572 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxc1Q61572 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Foxc1Q61572 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Foxc1Q61572 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Foxc1Q61572 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Foxc1Q61572 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxc1Q61572 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Foxc1Q61572 Gm14523-201ENSMUST00000117260 558 ntBASIC15.93■□□□□ 0.14
Foxc1Q61572 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Foxc1Q61572 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.93■□□□□ 0.14
Foxc1Q61572 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxc1Q61572 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxc1Q61572 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Foxc1Q61572 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.92■□□□□ 0.14
Foxc1Q61572 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxc1Q61572 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
Foxc1Q61572 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxc1Q61572 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.9■□□□□ 0.14
Foxc1Q61572 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Foxc1Q61572 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxc1Q61572 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Foxc1Q61572 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxc1Q61572 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxc1Q61572 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxc1Q61572 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxc1Q61572 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Foxc1Q61572 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.89■□□□□ 0.13
Foxc1Q61572 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.89■□□□□ 0.13
Foxc1Q61572 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxc1Q61572 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.89■□□□□ 0.13
Foxc1Q61572 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxc1Q61572 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxc1Q61572 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxc1Q61572 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms