Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Spg11Q3UHA3 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Gm27011-201ENSMUST00000182352 972 ntBASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Spg11Q3UHA3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Spg11Q3UHA3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.23■□□□□ 0.99
Spg11Q3UHA3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg11Q3UHA3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Spg11Q3UHA3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.22■□□□□ 0.99
Spg11Q3UHA3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.22■□□□□ 0.99
Spg11Q3UHA3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.2■□□□□ 0.99
Spg11Q3UHA3 Golgb1-201ENSMUST00000023534 498 ntBASIC21.2■□□□□ 0.99
Spg11Q3UHA3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.14■□□□□ 0.98
Spg11Q3UHA3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Spg11Q3UHA3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Spg11Q3UHA3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Spg11Q3UHA3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Spg11Q3UHA3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Spg11Q3UHA3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Spg11Q3UHA3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Spg11Q3UHA3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Spg11Q3UHA3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.12■□□□□ 0.97
Spg11Q3UHA3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Spg11Q3UHA3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Spg11Q3UHA3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Spg11Q3UHA3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Spg11Q3UHA3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.08■□□□□ 0.97
Spg11Q3UHA3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Spg11Q3UHA3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Spg11Q3UHA3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Spg11Q3UHA3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms