Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brf2Q3UAW9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brf2Q3UAW9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Brf2Q3UAW9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brf2Q3UAW9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.77■□□□□ 0.92
Brf2Q3UAW9 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.77■□□□□ 0.92
Brf2Q3UAW9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
Brf2Q3UAW9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.77■□□□□ 0.92
Brf2Q3UAW9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brf2Q3UAW9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brf2Q3UAW9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Brf2Q3UAW9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Brf2Q3UAW9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Brf2Q3UAW9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Brf2Q3UAW9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Brf2Q3UAW9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Brf2Q3UAW9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.75■□□□□ 0.91
Brf2Q3UAW9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brf2Q3UAW9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brf2Q3UAW9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brf2Q3UAW9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brf2Q3UAW9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brf2Q3UAW9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.75■□□□□ 0.91
Brf2Q3UAW9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.75■□□□□ 0.91
Brf2Q3UAW9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brf2Q3UAW9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Brf2Q3UAW9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Brf2Q3UAW9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brf2Q3UAW9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brf2Q3UAW9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Brf2Q3UAW9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brf2Q3UAW9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brf2Q3UAW9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brf2Q3UAW9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brf2Q3UAW9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Brf2Q3UAW9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Brf2Q3UAW9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Brf2Q3UAW9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.72■□□□□ 0.91
Brf2Q3UAW9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Brf2Q3UAW9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Brf2Q3UAW9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Brf2Q3UAW9 Scarna2-201ENSMUST00000157560 414 ntBASIC20.71■□□□□ 0.91
Brf2Q3UAW9 Gm9806-201ENSMUST00000051080 552 ntBASIC20.71■□□□□ 0.91
Brf2Q3UAW9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Brf2Q3UAW9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Brf2Q3UAW9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Brf2Q3UAW9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Brf2Q3UAW9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Brf2Q3UAW9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Brf2Q3UAW9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Brf2Q3UAW9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.7■□□□□ 0.9
Brf2Q3UAW9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.7■□□□□ 0.9
Brf2Q3UAW9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Brf2Q3UAW9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Brf2Q3UAW9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brf2Q3UAW9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Brf2Q3UAW9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.68■□□□□ 0.9
Brf2Q3UAW9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.68■□□□□ 0.9
Brf2Q3UAW9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Brf2Q3UAW9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brf2Q3UAW9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Brf2Q3UAW9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brf2Q3UAW9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brf2Q3UAW9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brf2Q3UAW9 Gm44428-201ENSMUST00000204474 874 ntBASIC20.66■□□□□ 0.9
Brf2Q3UAW9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brf2Q3UAW9 Gm16437-201ENSMUST00000025669 507 ntBASIC20.66■□□□□ 0.9
Brf2Q3UAW9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Brf2Q3UAW9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brf2Q3UAW9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brf2Q3UAW9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brf2Q3UAW9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brf2Q3UAW9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brf2Q3UAW9 Gm11687-201ENSMUST00000118911 886 ntBASIC20.65■□□□□ 0.9
Brf2Q3UAW9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.65■□□□□ 0.9
Brf2Q3UAW9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.64■□□□□ 0.9
Brf2Q3UAW9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brf2Q3UAW9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Brf2Q3UAW9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Brf2Q3UAW9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.63■□□□□ 0.89
Brf2Q3UAW9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brf2Q3UAW9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brf2Q3UAW9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Brf2Q3UAW9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brf2Q3UAW9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brf2Q3UAW9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brf2Q3UAW9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Brf2Q3UAW9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brf2Q3UAW9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Brf2Q3UAW9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Brf2Q3UAW9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brf2Q3UAW9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brf2Q3UAW9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brf2Q3UAW9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brf2Q3UAW9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.6■□□□□ 0.89
Brf2Q3UAW9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brf2Q3UAW9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brf2Q3UAW9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Brf2Q3UAW9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brf2Q3UAW9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms