Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec61a1P61620 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec61a1P61620 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec61a1P61620 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec61a1P61620 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Sec61a1P61620 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sec61a1P61620 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sec61a1P61620 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sec61a1P61620 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a1P61620 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sec61a1P61620 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a1P61620 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.25■□□□□ 0.67
Sec61a1P61620 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Sec61a1P61620 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.25■□□□□ 0.67
Sec61a1P61620 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a1P61620 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sec61a1P61620 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sec61a1P61620 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.24■□□□□ 0.67
Sec61a1P61620 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec61a1P61620 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a1P61620 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a1P61620 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a1P61620 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a1P61620 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a1P61620 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a1P61620 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sec61a1P61620 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a1P61620 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Sec61a1P61620 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a1P61620 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.22■□□□□ 0.67
Sec61a1P61620 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a1P61620 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a1P61620 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a1P61620 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Sec61a1P61620 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec61a1P61620 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.21■□□□□ 0.67
Sec61a1P61620 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec61a1P61620 Gm4799-201ENSMUST00000095396 657 ntBASIC19.21■□□□□ 0.67
Sec61a1P61620 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sec61a1P61620 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a1P61620 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Sec61a1P61620 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a1P61620 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a1P61620 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a1P61620 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a1P61620 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a1P61620 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a1P61620 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Sec61a1P61620 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.19■□□□□ 0.66
Sec61a1P61620 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sec61a1P61620 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a1P61620 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sec61a1P61620 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a1P61620 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a1P61620 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a1P61620 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.17■□□□□ 0.66
Sec61a1P61620 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a1P61620 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a1P61620 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a1P61620 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a1P61620 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a1P61620 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a1P61620 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a1P61620 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a1P61620 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a1P61620 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.16■□□□□ 0.66
Sec61a1P61620 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a1P61620 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Sec61a1P61620 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a1P61620 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sec61a1P61620 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a1P61620 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a1P61620 Mir3960-201ENSMUST00000198213 73 ntBASIC19.15■□□□□ 0.66
Sec61a1P61620 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a1P61620 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a1P61620 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a1P61620 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a1P61620 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sec61a1P61620 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a1P61620 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.15■□□□□ 0.66
Sec61a1P61620 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.15■□□□□ 0.66
Sec61a1P61620 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sec61a1P61620 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sec61a1P61620 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sec61a1P61620 Gm45364-201ENSMUST00000210883 159 ntBASIC19.14■□□□□ 0.65
Sec61a1P61620 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Sec61a1P61620 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.14■□□□□ 0.65
Sec61a1P61620 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.13■□□□□ 0.65
Sec61a1P61620 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.13■□□□□ 0.65
Sec61a1P61620 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec61a1P61620 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms