Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcnfP51944 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcnfP51944 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CcnfP51944 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.12■□□□□ 0.97
CcnfP51944 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcnfP51944 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcnfP51944 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcnfP51944 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CcnfP51944 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.11■□□□□ 0.97
CcnfP51944 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CcnfP51944 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
CcnfP51944 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CcnfP51944 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CcnfP51944 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CcnfP51944 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CcnfP51944 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CcnfP51944 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CcnfP51944 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CcnfP51944 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CcnfP51944 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CcnfP51944 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CcnfP51944 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CcnfP51944 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CcnfP51944 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnfP51944 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnfP51944 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnfP51944 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CcnfP51944 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CcnfP51944 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnfP51944 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnfP51944 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnfP51944 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CcnfP51944 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CcnfP51944 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CcnfP51944 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CcnfP51944 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CcnfP51944 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CcnfP51944 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CcnfP51944 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.05■□□□□ 0.96
CcnfP51944 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CcnfP51944 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CcnfP51944 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CcnfP51944 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CcnfP51944 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CcnfP51944 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CcnfP51944 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.05■□□□□ 0.96
CcnfP51944 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CcnfP51944 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CcnfP51944 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CcnfP51944 Gm22567-201ENSMUST00000175542 342 ntBASIC21.04■□□□□ 0.96
CcnfP51944 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CcnfP51944 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CcnfP51944 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CcnfP51944 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CcnfP51944 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CcnfP51944 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CcnfP51944 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CcnfP51944 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CcnfP51944 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CcnfP51944 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CcnfP51944 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.02■□□□□ 0.96
CcnfP51944 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CcnfP51944 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CcnfP51944 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
CcnfP51944 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.02■□□□□ 0.95
CcnfP51944 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CcnfP51944 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CcnfP51944 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CcnfP51944 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CcnfP51944 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CcnfP51944 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CcnfP51944 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CcnfP51944 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21■□□□□ 0.95
CcnfP51944 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21■□□□□ 0.95
CcnfP51944 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CcnfP51944 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CcnfP51944 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.98■□□□□ 0.95
CcnfP51944 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.98■□□□□ 0.95
CcnfP51944 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.98■□□□□ 0.95
CcnfP51944 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CcnfP51944 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.98■□□□□ 0.95
CcnfP51944 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CcnfP51944 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CcnfP51944 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CcnfP51944 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.97■□□□□ 0.95
CcnfP51944 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CcnfP51944 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.96■□□□□ 0.95
CcnfP51944 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.96■□□□□ 0.95
CcnfP51944 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CcnfP51944 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CcnfP51944 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CcnfP51944 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
CcnfP51944 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CcnfP51944 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CcnfP51944 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CcnfP51944 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CcnfP51944 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CcnfP51944 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.95■□□□□ 0.94
CcnfP51944 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CcnfP51944 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 253.1 ms