Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hnf4aP49698 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.31■■□□□ 1
Hnf4aP49698 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.31■■□□□ 1
Hnf4aP49698 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Hnf4aP49698 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Hnf4aP49698 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.31■■□□□ 1
Hnf4aP49698 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Hnf4aP49698 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hnf4aP49698 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.3■■□□□ 1
Hnf4aP49698 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hnf4aP49698 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hnf4aP49698 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hnf4aP49698 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hnf4aP49698 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.3■■□□□ 1
Hnf4aP49698 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hnf4aP49698 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Hnf4aP49698 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hnf4aP49698 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hnf4aP49698 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hnf4aP49698 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Hnf4aP49698 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.28■■□□□ 1
Hnf4aP49698 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Hnf4aP49698 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hnf4aP49698 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Hnf4aP49698 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.28■■□□□ 1
Hnf4aP49698 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hnf4aP49698 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hnf4aP49698 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hnf4aP49698 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hnf4aP49698 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hnf4aP49698 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hnf4aP49698 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hnf4aP49698 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hnf4aP49698 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hnf4aP49698 Scarna2-201ENSMUST00000157560 414 ntBASIC21.26■□□□□ 0.99
Hnf4aP49698 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Hnf4aP49698 Gm9806-201ENSMUST00000051080 552 ntBASIC21.26■□□□□ 0.99
Hnf4aP49698 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hnf4aP49698 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hnf4aP49698 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hnf4aP49698 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.25■□□□□ 0.99
Hnf4aP49698 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hnf4aP49698 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hnf4aP49698 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hnf4aP49698 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hnf4aP49698 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Hnf4aP49698 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hnf4aP49698 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.23■□□□□ 0.99
Hnf4aP49698 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hnf4aP49698 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hnf4aP49698 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hnf4aP49698 Gm44428-201ENSMUST00000204474 874 ntBASIC21.23■□□□□ 0.99
Hnf4aP49698 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hnf4aP49698 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hnf4aP49698 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hnf4aP49698 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hnf4aP49698 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hnf4aP49698 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hnf4aP49698 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hnf4aP49698 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Hnf4aP49698 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Hnf4aP49698 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hnf4aP49698 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.21■□□□□ 0.99
Hnf4aP49698 Gm16437-201ENSMUST00000025669 507 ntBASIC21.21■□□□□ 0.99
Hnf4aP49698 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hnf4aP49698 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hnf4aP49698 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hnf4aP49698 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Hnf4aP49698 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Hnf4aP49698 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.2■□□□□ 0.98
Hnf4aP49698 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hnf4aP49698 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hnf4aP49698 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hnf4aP49698 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hnf4aP49698 Gm11687-201ENSMUST00000118911 886 ntBASIC21.19■□□□□ 0.98
Hnf4aP49698 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hnf4aP49698 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hnf4aP49698 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hnf4aP49698 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hnf4aP49698 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hnf4aP49698 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.18■□□□□ 0.98
Hnf4aP49698 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Hnf4aP49698 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.18■□□□□ 0.98
Hnf4aP49698 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hnf4aP49698 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.18■□□□□ 0.98
Hnf4aP49698 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hnf4aP49698 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hnf4aP49698 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hnf4aP49698 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hnf4aP49698 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hnf4aP49698 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hnf4aP49698 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hnf4aP49698 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hnf4aP49698 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hnf4aP49698 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hnf4aP49698 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Hnf4aP49698 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.16■□□□□ 0.98
Hnf4aP49698 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hnf4aP49698 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hnf4aP49698 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms