Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 TPK1YJL164C 1194 nt8.04□□□□□ -1.12
NMD2P38798 SEC23YPR181C 2307 nt8.04□□□□□ -1.12
NMD2P38798 EFM1YHL039W 1758 nt8.04□□□□□ -1.12
NMD2P38798 YHR020WYHR020W 2067 nt8.04□□□□□ -1.12
NMD2P38798 LCL3YGL085W 825 nt8.03□□□□□ -1.12
NMD2P38798 NTG1YAL015C 1200 nt8.03□□□□□ -1.12
NMD2P38798 HMS2YJR147W 1077 nt8.03□□□□□ -1.12
NMD2P38798 YNR014WYNR014W 639 nt8.03□□□□□ -1.12
NMD2P38798 JIP4YDR475C 2631 nt8.02□□□□□ -1.12
NMD2P38798 VMA2YBR127C 1554 nt8.02□□□□□ -1.13
NMD2P38798 ARO10YDR380W 1908 nt8.02□□□□□ -1.13
NMD2P38798 MRPL35YDR322W 1104 nt8.02□□□□□ -1.13
NMD2P38798 ERP5YHR110W 639 nt8.02□□□□□ -1.13
NMD2P38798 ASF1YJL115W 840 nt8.02□□□□□ -1.13
NMD2P38798 YKL102CYKL102C 306 nt8.02□□□□□ -1.13
NMD2P38798 IRC11YOR013W 471 nt8.02□□□□□ -1.13
NMD2P38798 YFR006WYFR006W 1608 nt8.02□□□□□ -1.13
NMD2P38798 RSP5YER125W 2430 nt8.02□□□□□ -1.13
NMD2P38798 KIN1YDR122W 3195 nt8.01□□□□□ -1.13
NMD2P38798 MPA43YNL249C 1629 nt8.01□□□□□ -1.13
NMD2P38798 CDC11YJR076C 1248 nt8.01□□□□□ -1.13
NMD2P38798 YNL092WYNL092W 1203 nt8.01□□□□□ -1.13
NMD2P38798 COQ1YBR003W 1422 nt8.01□□□□□ -1.13
NMD2P38798 FMO1YHR176W 1299 nt8□□□□□ -1.13
NMD2P38798 CNM67YNL225C 1746 nt8□□□□□ -1.13
NMD2P38798 PPM2YOL141W 2088 nt7.99□□□□□ -1.13
NMD2P38798 STT3YGL022W 2157 nt7.98□□□□□ -1.13
NMD2P38798 CBT1YKL208W 816 nt7.98□□□□□ -1.13
NMD2P38798 RNH1YMR234W 1047 nt7.98□□□□□ -1.13
NMD2P38798 MRPL23YOR150W 492 nt7.98□□□□□ -1.13
NMD2P38798 SCO2YBR024W 906 nt7.98□□□□□ -1.13
NMD2P38798 SIR2YDL042C 1689 nt7.98□□□□□ -1.13
NMD2P38798 CDS1YBR029C 1374 nt7.97□□□□□ -1.13
NMD2P38798 PPH22YDL188C 1134 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)BtG(GCC)B 71 nt7.97□□□□□ -1.13
NMD2P38798 SUF16tG(GCC)C 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)D1tG(GCC)D1 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)D2tG(GCC)D2 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)EtG(GCC)E 71 nt7.97□□□□□ -1.13
NMD2P38798 SUF20tG(GCC)F1 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)F2tG(GCC)F2 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)G1tG(GCC)G1 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)G2tG(GCC)G2 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)J1tG(GCC)J1 71 nt7.97□□□□□ -1.13
NMD2P38798 SUF23tG(GCC)J2 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)MtG(GCC)M 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)O1tG(GCC)O1 71 nt7.97□□□□□ -1.13
NMD2P38798 SUF17tG(GCC)O2 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)P1tG(GCC)P1 71 nt7.97□□□□□ -1.13
NMD2P38798 tG(GCC)P2tG(GCC)P2 71 nt7.97□□□□□ -1.13
NMD2P38798 TAF11YML015C 1041 nt7.96□□□□□ -1.14
NMD2P38798 RRN10YBL025W 438 nt7.96□□□□□ -1.14
NMD2P38798 OCA1YNL099C 717 nt7.96□□□□□ -1.14
NMD2P38798 MKK1YOR231W 1527 nt7.96□□□□□ -1.14
NMD2P38798 PET112YBL080C 1626 nt7.96□□□□□ -1.14
NMD2P38798 SAL1YNL083W 1485 nt7.95□□□□□ -1.14
NMD2P38798 TAF9YMR236W 474 nt7.95□□□□□ -1.14
NMD2P38798 GUF1YLR289W 1938 nt7.95□□□□□ -1.14
NMD2P38798 DEF1YKL054C 2217 nt7.95□□□□□ -1.14
NMD2P38798 PEX31YGR004W 1389 nt7.95□□□□□ -1.14
NMD2P38798 RSC2YLR357W 2670 nt7.95□□□□□ -1.14
NMD2P38798 NOG2YNR053C 1461 nt7.94□□□□□ -1.14
NMD2P38798 YIL029W-AYIL029W-A 372 nt7.94□□□□□ -1.14
NMD2P38798 MRPS18YNL306W 654 nt7.94□□□□□ -1.14
NMD2P38798 DFR1YOR236W 636 nt7.94□□□□□ -1.14
NMD2P38798 FET4YMR319C 1659 nt7.94□□□□□ -1.14
NMD2P38798 QCR6YFR033C 444 nt7.93□□□□□ -1.14
NMD2P38798 DID2YKR035W-A 615 nt7.93□□□□□ -1.14
NMD2P38798 HOS2YGL194C 1359 nt7.93□□□□□ -1.14
NMD2P38798 YMR027WYMR027W 1413 nt7.93□□□□□ -1.14
NMD2P38798 DAL4YIR028W 1908 nt7.92□□□□□ -1.14
NMD2P38798 YRB2YIL063C 984 nt7.92□□□□□ -1.14
NMD2P38798 YIR020W-AYIR020W-A 243 nt7.92□□□□□ -1.14
NMD2P38798 GCN3YKR026C 918 nt7.92□□□□□ -1.14
NMD2P38798 ILV6YCL009C 930 nt7.92□□□□□ -1.14
NMD2P38798 COX10YPL172C 1389 nt7.92□□□□□ -1.14
NMD2P38798 TKL2YBR117C 2046 nt7.91□□□□□ -1.14
NMD2P38798 YLL066CYLL066C 3618 nt7.91□□□□□ -1.14
NMD2P38798 YDL023CYDL023C 321 nt7.91□□□□□ -1.14
NMD2P38798 ATG36YJL185C 882 nt7.91□□□□□ -1.14
NMD2P38798 RPL5YPL131W 894 nt7.91□□□□□ -1.14
NMD2P38798 YHK8YHR048W 1545 nt7.91□□□□□ -1.14
NMD2P38798 MSN2YMR037C 2115 nt7.9□□□□□ -1.14
NMD2P38798 HIS1YER055C 894 nt7.9□□□□□ -1.14
NMD2P38798 GCG1YER163C 699 nt7.9□□□□□ -1.14
NMD2P38798 DYS1YHR068W 1164 nt7.9□□□□□ -1.14
NMD2P38798 YMR147WYMR147W 672 nt7.9□□□□□ -1.14
NMD2P38798 HMT1YBR034C 1047 nt7.9□□□□□ -1.14
NMD2P38798 ECM2YBR065C 1095 nt7.9□□□□□ -1.14
NMD2P38798 BPL1YDL141W 2073 nt7.9□□□□□ -1.15
NMD2P38798 HEM2YGL040C 1029 nt7.89□□□□□ -1.15
NMD2P38798 AIM20YIL158W 615 nt7.89□□□□□ -1.15
NMD2P38798 MIA40YKL195W 1212 nt7.89□□□□□ -1.15
NMD2P38798 RFC4YOL094C 972 nt7.89□□□□□ -1.15
NMD2P38798 GTT3YEL017W 1014 nt7.88□□□□□ -1.15
NMD2P38798 YHR213W-BYHR213W-B 300 nt7.88□□□□□ -1.15
NMD2P38798 YAR064WYAR064W 300 nt7.88□□□□□ -1.15
NMD2P38798 CUE4YML101C 354 nt7.88□□□□□ -1.15
NMD2P38798 EDE1YBL047C 4146 nt7.88□□□□□ -1.15
NMD2P38798 HEM1YDR232W 1647 nt7.88□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 88.5 ms