Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CtgfP29268 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CtgfP29268 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CtgfP29268 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CtgfP29268 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CtgfP29268 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CtgfP29268 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CtgfP29268 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtgfP29268 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtgfP29268 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtgfP29268 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CtgfP29268 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CtgfP29268 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CtgfP29268 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtgfP29268 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtgfP29268 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CtgfP29268 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CtgfP29268 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CtgfP29268 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CtgfP29268 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CtgfP29268 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CtgfP29268 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CtgfP29268 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CtgfP29268 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CtgfP29268 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.66■□□□□ 0.9
CtgfP29268 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CtgfP29268 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CtgfP29268 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CtgfP29268 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CtgfP29268 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CtgfP29268 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CtgfP29268 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CtgfP29268 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CtgfP29268 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CtgfP29268 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CtgfP29268 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CtgfP29268 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.65■□□□□ 0.9
CtgfP29268 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CtgfP29268 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CtgfP29268 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CtgfP29268 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CtgfP29268 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CtgfP29268 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CtgfP29268 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CtgfP29268 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CtgfP29268 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.63■□□□□ 0.89
CtgfP29268 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CtgfP29268 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CtgfP29268 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CtgfP29268 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CtgfP29268 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CtgfP29268 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.62■□□□□ 0.89
CtgfP29268 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
CtgfP29268 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CtgfP29268 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CtgfP29268 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CtgfP29268 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CtgfP29268 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CtgfP29268 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CtgfP29268 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CtgfP29268 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CtgfP29268 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.6■□□□□ 0.89
CtgfP29268 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CtgfP29268 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CtgfP29268 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CtgfP29268 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CtgfP29268 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CtgfP29268 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CtgfP29268 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.59■□□□□ 0.89
CtgfP29268 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CtgfP29268 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CtgfP29268 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CtgfP29268 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CtgfP29268 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CtgfP29268 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CtgfP29268 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.58■□□□□ 0.89
CtgfP29268 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CtgfP29268 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CtgfP29268 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.58■□□□□ 0.88
CtgfP29268 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CtgfP29268 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CtgfP29268 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CtgfP29268 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CtgfP29268 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CtgfP29268 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CtgfP29268 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.57■□□□□ 0.88
CtgfP29268 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.57■□□□□ 0.88
CtgfP29268 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CtgfP29268 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.57■□□□□ 0.88
CtgfP29268 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CtgfP29268 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CtgfP29268 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CtgfP29268 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CtgfP29268 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CtgfP29268 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.56■□□□□ 0.88
CtgfP29268 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CtgfP29268 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CtgfP29268 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CtgfP29268 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CtgfP29268 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms