Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf1aP25118 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf1aP25118 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf1aP25118 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf1aP25118 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf1aP25118 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf1aP25118 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tnfrsf1aP25118 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf1aP25118 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf1aP25118 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf1aP25118 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf1aP25118 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf1aP25118 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf1aP25118 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf1aP25118 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf1aP25118 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf1aP25118 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf1aP25118 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf1aP25118 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.37■□□□□ 0.53
Tnfrsf1aP25118 Gm6311-201ENSMUST00000073790 878 ntBASIC18.37■□□□□ 0.53
Tnfrsf1aP25118 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf1aP25118 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf1aP25118 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tnfrsf1aP25118 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tnfrsf1aP25118 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf1aP25118 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf1aP25118 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf1aP25118 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf1aP25118 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf1aP25118 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf1aP25118 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf1aP25118 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf1aP25118 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf1aP25118 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfrsf1aP25118 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1aP25118 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf1aP25118 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1aP25118 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.34■□□□□ 0.53
Tnfrsf1aP25118 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1aP25118 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.34■□□□□ 0.53
Tnfrsf1aP25118 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf1aP25118 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tnfrsf1aP25118 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf1aP25118 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.33■□□□□ 0.53
Tnfrsf1aP25118 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1aP25118 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1aP25118 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf1aP25118 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf1aP25118 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1aP25118 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf1aP25118 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1aP25118 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.31■□□□□ 0.52
Tnfrsf1aP25118 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnfrsf1aP25118 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1aP25118 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Tnfrsf1aP25118 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
Tnfrsf1aP25118 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1aP25118 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf1aP25118 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf1aP25118 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf1aP25118 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.29■□□□□ 0.52
Tnfrsf1aP25118 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf1aP25118 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf1aP25118 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf1aP25118 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf1aP25118 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf1aP25118 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tnfrsf1aP25118 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms